Pre_GI Gene

Some Help

Host: NC_009800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009800:3224575 Escherichia coli HS, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32245753225246672hypothetical proteinBLASTP
322525232264121161glutathionylspermidine synthase family proteinQuickGO ontologyBLASTP
32264503227265816aromatic ring-opening dioxygenaseQuickGO ontologyBLASTP
32273813228154774zinc transporter ZupTQuickGO ontologyBLASTP
32282123228406195hypothetical proteinBLASTP
3228644322929765434-dihydroxy-2-butanone 4-phosphate synthaseQuickGO ontologyBLASTP
32296113229961351hypothetical proteinBLASTP
32302453230796552fimbrial proteinQuickGO ontologyBLASTP
323085632333572502fimbrial usher proteinQuickGO ontologyBLASTP
32333793234128750periplasmic pilus chaperone family proteinQuickGO ontologyBLASTP
323413032351941065hypothetical proteinBLASTP
32352373235437201glycogen synthesis protein GlgSQuickGO ontologyBLASTP
32357063236335630putative inner membrane proteinQuickGO ontologyBLASTP
32381403238289150QUAD RNAQuickGO ontologyBLASTP
32385153238664150QUAD RNAQuickGO ontologyBLASTP
323870932401421434bifunctional protein HldEQuickGO ontologyBLASTP
324019032430302841glutamate-ammonia ligase adenylyltransferaseQuickGO ontologyBLASTP
324305332443541302adenylate cyclaseQuickGO ontologyBLASTP
32445963245216621hypothetical proteinBLASTP