Pre_GI: BLASTP Hits

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Query: NC_009512:4375452:4400085 Pseudomonas putida F1, complete genome

Start: 4400085, End: 4401632, Length: 1548

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:2374852:2382133238213323836831551Bordetella petrii, complete genomesulfatase involved in polysaccharide biosynthesis1e-94347
NC_010814:1551624:1618110161811016196571548Geobacter lovleyi SZ, complete genomesulfatase4e-91335
NC_007510:759905:7831007831007846291530Burkholderia sp. 383 chromosome 1, complete sequenceSulfatase1e-78294
NC_008542:855347:8796578796578811951539Burkholderia cenocepacia HI2424 chromosome 1, complete sequencesulfatase2e-74280
NC_008060:306170:3317443317443332341491Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencesulfatase4e-74279
NC_010508:809974:8353438353438368661524Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencesulfatase2e-72273
NC_015381:766355:7927437927437942841542Burkholderia gladioli BSR3 chromosome 1, complete sequencesulfatase9e-71268
NC_011000:3514338:3521991352199135235111521Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis sulfatase membrane protein1e-67257
NC_009074:3163362:3171005317100531725371533Burkholderia pseudomallei 668 chromosome I, complete sequencesulfatase2e-62240
NC_007434:3588081:3595724359572435972441521Burkholderia pseudomallei 1710b chromosome I, complete sequenceWcbQ9e-62238
NC_006350:3329477:3337120333712033386521533Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis transmembrane protein7e-62238
NC_009076:3179662:3187305318730531888371533Burkholderia pseudomallei 1106a chromosome I, complete sequencesulfatase7e-62238
NC_006348:2372945:2380588238058823821081521Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis protein WcbQ2e-61236
NC_008785:516500:5416385416385431701533Burkholderia mallei SAVP1 chromosome II, complete sequenceputative capsular polysaccharide biosynthesis protein WcbQ2e-61236
NC_009080:2123987:2131630213163021331621533Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative capsular polysaccharide biosynthesis protein WcbQ2e-61236
NC_008836:1072721:1080364108036410818961533Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative capsular polysaccharide biosynthesis protein WcbQ2e-61236
NC_017033:3013654:3039819303981930413421524Frateuria aurantia DSM 6220 chromosome, complete genomephosphoglycerol transferase family protein, alkaline phosphatase superfamily4e-60233
NC_010125:2483122:2488684248868424902671584Gluconacetobacter diazotrophicus PAl 5, complete genomeputative capsular polysaccharide biosynthesis protein1e-41171
NC_006677:1596560:1615601161560116169501350Gluconobacter oxydans 621H, complete genomeCapsule polysaccharide biosynthesis protein4e-33142
NC_010336:1248071:1249183124918312505801398Francisella philomiragia subsp. philomiragia ATCC 25017, completePhosphoglycerol transferase-like protein2e-28127
NC_012926:727716:7341397341397367002562Streptococcus suis BM407 chromosome, complete genomesulfatase3e-1687
NC_009442:1216355:1231135123113512336962562Streptococcus suis 05ZYH33 chromosome, complete genomephosphoglycerol transferase/alkaline phosphatase superfamily protein3e-1687
NC_012925:1125876:1142441114244111450022562Streptococcus suis P1/7, complete genomesulphatase3e-1687
NC_012781:302387:3167623167623186991938Eubacterium rectale ATCC 33656, complete genomesulfatase8e-1685.5
NC_009348:2738742:2758372275837227606452274Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-1585.1
NC_014169:703889:7038897038897059642076Bifidobacterium longum subsp. longum JDM301 chromosome, completesulfatase2e-1067.8
NC_007964:3638415:3644576364457636462641689Nitrobacter hamburgensis X14, complete genomesulfatase9e-1065.5
NC_003366:2556457:2558205255820525600941890Clostridium perfringens str. 13, complete genomehypothetical protein1e-0862
NC_008261:2770468:2772216277221627741051890Clostridium perfringens ATCC 13124, complete genomesulfatase1e-0862
NC_017218:2119964:2135521213552121377732253Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomearylsulfatase1e-0861.6
NC_015172:850802:8697618697618715901830Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesulfatase1e-0861.6
NC_010610:1580483:1622304162230416252432940Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-0860.8
NC_008262:2433979:2435726243572624376091884Clostridium perfringens SM101, complete genomesulfatase3e-0860.5
NC_016809:389561:4054244054244070791656Haemophilus influenzae 10810, complete genomePE-tn-6--lipooligosaccharide phosphorylethanolamine transferase6e-0859.3
NC_014923:79370:9409294092958401749Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesulfatase3e-0757
NC_004307:1815825:1821552182155218233151764Bifidobacterium longum NCC2705, complete genomehypothetical protein involved in polysaccharide biosynthesis3e-0757
NC_010723:420025:4424574424574443071851Clostridium botulinum E3 str. Alaska E43, complete genomesulfatase5e-0756.6
NC_010674:426256:4475034475034493531851Clostridium botulinum B str. Eklund 17B, complete genomesulfatase6e-0756.2