Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:3618055:3626571 Pseudomonas putida F1, complete genome

Start: 3626571, End: 3627377, Length: 807

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:891000:896416896416897228813Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-95348
NC_008463:4743296:476014847601484760960813Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-95348
NC_017506:3248724:326074032607403261546807Marinobacter adhaerens HP15 chromosome, complete genomeHNH endonuclease2e-60232
NC_014973:3452100:346505734650573465821765Geobacter sp. M18 chromosome, complete genomeHNH endonuclease5e-27121
NC_016822:1431200:144442814444281445171744Shigella sonnei 53G, complete genomeendonuclease2e-23109
NC_006177:2398482:242404824240482424860813Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-23109
NC_012108:442493:4548374548374559641128Desulfobacterium autotrophicum HRM2, complete genomeputative 5-methylcytosine-specific restriction enzyme A3e-23108
NC_014216:2538500:255566525556652555979315Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein2e-21103
NC_021150:4929670:493840049384004939143744Azotobacter vinelandii CA6, complete genomehypothetical protein2e-21103
NC_012560:4929683:493841349384134939156744Azotobacter vinelandii DJ, complete genomehypothetical protein2e-21103
NC_012731:600518:653235653235653873639Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-21103
NC_011206:1379068:138427413842741384912639Acidithiobacillus ferrooxidans ATCC 53993, complete genomerestriction endonuclease-like protein2e-2099.8
NC_014306:1810548:181883218188321819554723Erwinia billingiae Eb661, complete genomepredicted endonuclease2e-2099.8
NC_011283:4966471:497312949731294973767639Klebsiella pneumoniae 342 chromosome, complete genomeHNH endonuclease domain protein3e-2099
NC_014836:2620871:263431826343182635073756Desulfurispirillum indicum S5 chromosome, complete genomeHNH endonuclease5e-2098.2
NC_009648:5119271:513275851327585133360603Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-1997.1
NC_010322:5293652:530890053089005309745846Pseudomonas putida GB-1 chromosome, complete genomeHNH endonuclease1e-1997.1
NC_014206:2807879:281779028177902818551762Geobacillus sp. C56-T3 chromosome, complete genomeHNH endonuclease2e-1996.3
NC_010814:243384:261791261791262636846Geobacter lovleyi SZ, complete genomeHNH endonuclease6e-1994.7
NC_014220:70490:896678966790407741Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeHNH endonuclease2e-1893.2
NC_010498:4899167:490781649078164908457642Escherichia coli SMS-3-5, complete genomeHNH endonuclease domain-containing protein3e-1892.4
NC_014934:219000:229015229015229824810Cellulophaga algicola DSM 14237 chromosome, complete genomehnh endonuclease1e-1790.5
NC_019896:3491000:350933435093343509681348Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-1789
NC_013361:5580741:558447255844725585122651Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendonuclease5e-1788.2
NC_012673:2064298:2073393207339320744331041Exiguobacterium sp. AT1b, complete genomeHNH endonuclease6e-1788.2
NC_013730:3729626:3748609374860937497121104Spirosoma linguale DSM 74, complete genomeHNH endonuclease7e-1787.8
NC_015942:1920693:193747819374781938242765Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHNH endonuclease1e-1687
NC_013364:928486:940873940873941613741Escherichia coli O111:H- str. 11128, complete genomeendonuclease-like protein7e-1684.3
NC_013353:922937:935324935324936064741Escherichia coli O103:H2 str. 12009, complete genomeendonuclease7e-1684.3
AP010958:922937:935324935324936064741Escherichia coli O103:H2 str. 12009 DNA, complete genomeendonuclease-like protein7e-1684.3
NC_010322:1817598:185091618509161851860945Pseudomonas putida GB-1 chromosome, complete genomerestriction endonuclease-like protein2e-1582.8
NC_008346:2523289:253364525336452534469825Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeHnh endonuclease3e-1479
NC_021184:1729867:1768097176809717693171221Desulfotomaculum gibsoniae DSM 7213, complete genomeputative restriction endonuclease1e-1377
NC_013730:3729626:375240937524093753212804Spirosoma linguale DSM 74, complete genomeHNH endonuclease2e-1273.6
NC_015576:1442713:144833114483311449320990Mycobacterium sp. JDM601 chromosome, complete genomeHNH endonuclease3e-1272.4
NC_004129:4434259:444774744477474448595849Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-1271.2
NC_015379:6023926:603265360326536033618966Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-1067
NC_007347:1:117721177212521750Ralstonia eutropha JMP134 chromosome 1, complete sequenceHNH endonuclease2e-1066.6
NC_016002:1975000:198891019889101989800891Pseudogulbenkiania sp. NH8B, complete genomeHNH endonuclease3e-1065.9
NC_010571:637398:653983653983654768786Opitutus terrae PB90-1, complete genomerestriction endonuclease-like protein3e-1065.9
NC_012796:4075583:416030941603094161064756Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-1065.9
NC_009485:5171658:518387251838725184723852Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-0962.4
NC_007530:3462624:348605534860553486690636Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein4e-0962
NC_008435:604772:626347626347627216870Rhodopseudomonas palustris BisA53, complete genomerestriction endonuclease-like protein5e-0961.6
NC_010334:2131939:213883721388372139706870Shewanella halifaxensis HAW-EB4, complete genomerestriction endonuclease-like protein2e-0859.7
NC_009485:584707:592423592423593280858Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein1e-0757
NC_015957:336500:345618345618346355738Streptomyces violaceusniger Tu 4113 chromosome, complete genomeHNH endonuclease7e-0754.7
NC_016582:6999074:701308770130877013824738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeHNH endonuclease1e-0653.5
NC_013158:200424:232561232561233535975Halorhabdus utahensis DSM 12940, complete genomeHNH endonuclease2e-0653.1
NC_014655:130636:154602154602155471870Leadbetterella byssophila DSM 17132 chromosome, complete genomehnh endonuclease3e-0652.4