Pre_GI: BLASTP Hits

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Query: NC_009512:3334579:3352282 Pseudomonas putida F1, complete genome

Start: 3352282, End: 3352860, Length: 579

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:3478630:349763134976313498209579Hahella chejuensis KCTC 2396, complete genomeputative NADPH-quinone reductase (modulator of drug activity B)4e-55214
NC_010162:11766000:117816191178161911782308690Sorangium cellulosum 'So ce 56', complete genomeputative NAD(P)H dehydrogenase3e-39161
NC_015277:5211779:521177952117795212381603Sphingobacterium sp. 21 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-38158
NC_009348:3819271:383411838341183834726609Aeromonas salmonicida subsp. salmonicida A449, complete genomeNADPH-quinone reductase1e-37155
NC_015759:726612:732824732824733411588Weissella koreensis KACC 15510 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-24112
NC_013173:3890370:390309039030903903668579Desulfomicrobium baculatum DSM 4028, complete genomeNAD(P)H dehydrogenase (quinone)3e-2098.2
NC_015172:850802:874491874491875084594Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)7e-2096.7
NC_015760:2009425:202271620227162023279564Streptococcus salivarius CCHSS3, complete genomeribosyldihydronicotinamide dehydrogenase4e-1890.9
NC_013192:1824174:182619218261921826758567Leptotrichia buccalis DSM 1135, complete genomeNAD(P)H dehydrogenase (quinone)2e-1685.1
NC_013416:1588369:159845215984521599063612Aggregatibacter actinomycetemcomitans D11S-1, complete genomeNAD dehydrogenase3e-1684.7
NC_016513:1924242:193438219343821934993612Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeNAD dehydrogenase1e-1583.2
NC_006582:3827844:383840638384063838999594Bacillus clausii KSM-K16, complete genomeNAD(P)H oxidoreductase2e-1582.4
NC_015942:2316354:234748723474872348056570Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)9e-1580.1
NC_015690:3941113:397102739710273971611585Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein8e-1477
NC_010125:1011430:102107110210711021862792Gluconacetobacter diazotrophicus PAl 5, complete genomeputative NAD(P)H oxidoreductase6e-1373.9
NC_014650:1763308:176409317640931764704612Geobacillus sp. Y4.1MC1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-1272.8
NC_011365:1865687:189236418923641893155792Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRibosyldihydronicotinamide dehydrogenase (quinone)2e-1272.4
NC_018643:807405:819887819887820456570Alpha proteobacterium HIMB5 chromosome, complete genomeflavodoxin-like protein2e-1272
NC_015660:1784553:178533817853381785946609Geobacillus thermoglucosidasius C56-YS93 chromosome, completeNAD(P)H dehydrogenase (quinone)2e-1272
NC_007777:3000941:302234330223433023122780Frankia sp. CcI3, complete genomeNAD(P)H dehydrogenase (quinone)4e-1271.2
NC_015953:6212366:623664362366436237263621Streptomyces sp. SirexAA-E chromosome, complete genomeNAD(P)H dehydrogenase (quinone)7e-1270.5
NC_020126:7372685:737858073785807379413834Myxococcus stipitatus DSM 14675, complete genomeNAD(P)H oxidoreductase1e-1066.2
NC_015690:4592582:461160246116024612390789Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-1065.1
NC_006526:1976779:200340820034082004124717Zymomonas mobilis subsp. mobilis ZM4, complete genomeputative NAD(P)H quinone oxidoreductase2e-1065.1
NC_015172:1255956:125766412576641258248585Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)4e-1064.7
NC_015376:903939:912855912855913697843Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative NADPH-quinone reductase4e-1064.7
NC_016027:2580477:258503325850332585827795Gluconacetobacter xylinus NBRC 3288, complete genomeNAD(P)H dehydrogenase (quinone)4e-1064.3
NC_016830:2642881:264742926474292648220792Pseudomonas fluorescens F113 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)5e-1064.3
NC_009439:3535152:354769635476963548514819Pseudomonas mendocina ymp, complete genomeNAD(P)H dehydrogenase (quinone)7e-1063.5
NC_015379:4249238:426380942638094264600792Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative dehydrogenase9e-1063.2
NC_008314:2611873:262555326255532626329777Ralstonia eutropha H16 chromosome 2, complete sequenceNAD(P)H dehydrogenase [quinone]1e-0963.2
NC_016010:65949:754477544776055609Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeNAD(P)H oxidoreductase2e-0962.4
NC_007005:98488:131737131737132393657Pseudomonas syringae pv. syringae B728a, complete genomeNAD(P)H dehydrogenase (quinone)2e-0962
NC_015138:3160764:316882931688293169617789Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeribosyldihydronicotinamide dehydrogenase (quinone)4e-0961.2
NC_009801:995396:999193999193999783591Escherichia coli E24377A, complete genomeNADPH-dependent FMN reductase5e-0960.8
NC_008752:725189:768815768815769420606Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNAD(P)H dehydrogenase (quinone)1e-0859.7
NC_016906:408720:428459428459429220762Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative NAD(P)H dehydrogenase (quinone)1e-0859.3
NC_002947:4167500:424302642430264243733708Pseudomonas putida KT2440, complete genomeNAD(P)H quinone oxidoreductase, putative2e-0859.3
NC_008752:3902637:391373839137383914406669Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNAD(P)H dehydrogenase (quinone)2e-0858.5
NC_011894:5056901:507488150748815075474594Methylobacterium nodulans ORS 2060, complete genomeNAD(P)H dehydrogenase (quinone)1e-0756.6
NC_004547:1062410:106420710642071064794588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable NAD(P)H oxidoreductase9e-0856.6
NC_013169:1845735:186294918629491863743795Kytococcus sedentarius DSM 20547, complete genomeputative NADPH-quinone reductase (modulator of drug activity B)9e-0856.6
NC_010943:1332243:133841213384121339266855Stenotrophomonas maltophilia K279a, complete genomeputative NAD(P)H dehydrogenase [quinone]2e-0755.8
NC_015563:4206112:421723842172384217960723Delftia sp. Cs1-4 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)4e-0754.7
NC_015500:1204501:120918312091831209773591Treponema brennaborense DSM 12168 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-0652.4