Pre_GI: BLASTP Hits

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Query: NC_009480:99640:127043 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 127043, End: 128320, Length: 1278

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:8525000:8537128853712885384021275Streptomyces scabiei 87.22 chromosome, complete genomesubstrate-binding transporter8e-170597
NC_011886:404661:4213504213504226421293Arthrobacter chlorophenolicus A6, complete genomeextracellular solute-binding protein family 13e-111402
NC_013521:940495:9554699554699567851317Sanguibacter keddieii DSM 10542, complete genomecarbohydrate-binding protein1e-99363
NC_010407:3174470:3193095319309531944141320Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative sugar-binding transport lipoprotein1e-63244
NC_019673:2733327:2738550273855027398181269Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter, substrate-binding lipoprotein, family 12e-62239
NC_009142:6086000:6103567610356761048261260Saccharopolyspora erythraea NRRL 2338, complete genomeputative sugar binding secreted protein5e-59228
NC_016582:8243727:8250390825039082516911302Streptomyces bingchenggensis BCW-1 chromosome, complete genomesugar binding secreted protein1e-50201
NC_013947:6585847:6625447662544766267481302Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeextracellular solute-binding protein family 15e-50198
NC_016582:1751988:1764160176416017654761317Streptomyces bingchenggensis BCW-1 chromosome, complete genomesolute binding lipoprotein3e-48192
NC_011567:2327870:2334876233487623362251350Anoxybacillus flavithermus WK1, complete genomeABC-type sugar transport system, periplasmic component5e-47188
NC_013929:257635:2629282629282642051278Streptomyces scabiei 87.22 chromosome, complete genomesolute binding lipoprotein1e-46187
NC_014829:3741843:3753994375399437552951302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 14e-45182
NC_013093:2895511:2906250290625029075991350Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 15e-1272.8
NC_015577:1462874:1468358146835814696891332Treponema azotonutricium ZAS-9 chromosome, complete genomeputative family 1 extracellular solute-binding protein6e-1272.4
NC_013174:309943:3295333295333308551323Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 14e-1169.3
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-1066.2
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein7e-0962
NC_015675:2567000:2580950258095025822211272Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0861.2
NC_015732:773143:7933897933897946871299Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 12e-0860.8
NC_019973:2417000:2430787243078724320581272Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component4e-0756.2
NC_013093:2132284:2140041214004121413601320Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 12e-0654.3
NC_004547:913553:9385309385309397951266Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative sugar ABC transporter, periplasmic binding protein4e-0652.8
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein5e-0652.8
NC_017221:2268276:2284399228439922855711173Bifidobacterium longum subsp. longum KACC 91563 chromosome,ABC transporter substrate-binding protein5e-0652.8