Pre_GI: BLASTP Hits

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Query: NC_009480:703102:709446 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 709446, End: 716102, Length: 6657

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014151:1033736:1035332103533210419796648Cellulomonas flavigena DSM 20109 chromosome, complete genomeYD repeat protein01038
NC_018681:5627940:5657622565762256627575136Nocardia brasiliensis ATCC 700358 chromosome, complete genomePA14 domain-containing protein2e-142508
NC_013093:3157897:3164541316454131718847344Actinosynnema mirum DSM 43827, complete genomeYD repeat protein9e-101370
NC_014151:1033736:1042940104294010443701431Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-39166
NC_008555:400352:4061494061494127276579Listeria welshimeri serovar 6b str. SLCC5334, complete genomewall-associated RHS family protein, putative2e-24116
NC_011660:2175537:2181302218130221878986597Listeria monocytogenes HCC23 chromosome, complete genomewall-associated protein1e-21107
NC_013730:3208571:3242301324230132459213621Spirosoma linguale DSM 74, complete genomeGlycosyl hydrolase family 98 putative carbohydrate binding module5e-21105
NC_003212:456214:4631384631384696416504Listeria innocua Clip11262, complete genomehypothetical protein1e-20103
NC_002973:461712:4675164675164741036588Listeria monocytogenes str. 4b F2365, complete genomewall-associated protein, putative3e-20102
NC_003909:1205605:1208901120890112156416741Bacillus cereus ATCC 10987, complete genomewall associated protein, putative1e-19100
NC_020244:3856526:3862033386203338689656933Bacillus subtilis XF-1, complete genomecell wall-associated protein precursor8e-1997.8
NC_014976:2024364:2030409203040920374137005Bacillus subtilis BSn5 chromosome, complete genomewall-associated protein3e-1896.3
NC_000964:4015005:4022562402256240295667005Bacillus subtilis subsp. subtilis str. 168, complete genomecell wall-associated protein precursor (CWBP200, 105, 62)3e-1895.9
NC_003997:1068000:1075334107533410820086675Bacillus anthracis str. Ames, complete genomewall-associated protein, putative4e-1895.5
NC_007530:1068000:1075334107533410820086675Bacillus anthracis str. 'Ames Ancestor', complete genomewall-associated protein, putative4e-1895.5
NC_014479:3825195:3842151384215138491677017Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecell wall-associated protein precursor4e-1895.5
NC_017195:3815491:3822752382275238297597008Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRHS Repeat family6e-1791.7
NC_009848:2335265:2342031234203123490537023Bacillus pumilus SAFR-032, complete genomecell wall-associated protein3e-1689.4
NC_016114:1474000:14893971489397149996210566Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein2e-1380.1
NC_013526:955848:9692869692869722222937Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomePA14 domain protein6e-1378.6
NC_009380:336024:3450063450063548279822Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein5e-1378.6
NC_019673:3582004:3582004358200435882226219Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-1377.8
NC_020410:3715210:3723300372330037302596960Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completecell wall-associated protein precursor2e-1277
NC_010572:3314500:3338156333815633444196264Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-1275.5
NC_019842:3755275:3769085376908537761167032Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,wall-associated protein4e-1275.5
NC_016609:6136411:6137741613774161399752235Niastella koreensis GR20-10 chromosome, complete genomePA14 domain-containing protein1e-1173.9
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein2e-1173.6
NC_016593:3116145:3122850312285031285165667Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-1172.8
NC_019978:1182056:1195795119579512013565562Halobacteroides halobius DSM 5150, complete genomeRHS repeat-associated core domain protein3e-1172.8
NC_011567:2468708:2488086248808624897801695Anoxybacillus flavithermus WK1, complete genomeRhs family protein8e-1171.2
NC_006510:1014500:1019616101961610265216906Geobacillus kaustophilus HTA426, complete genomecell wall-associated protein precursor5e-0965.5
NC_015425:369225:3774633774633836036141Clostridium botulinum BKT015925 chromosome, complete genomeputative cell wall associated protein5e-0965.5
NC_014666:2589227:2599322259932226092729951Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function DUF15572e-0863.5
NC_013595:7302888:7311371731137173177126342Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-0760.8
NC_013169:1545890:1555084155508415568171734Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-0760.5
NC_009380:1177316:1191864119186411947102847Salinispora tropica CNB-440 chromosome, complete genomeLamG domain-containing protein3e-0759.3
NC_017955:3731480:3842891384289138479995109Modestobacter marinus, complete genomehypothetical protein3e-0759.3
NC_017506:1996652:2023179202317920252032025Marinobacter adhaerens HP15 chromosome, complete genomebeta 1,4-N-acetylgalactosaminyltransferase-transferase-III-like protein3e-0759.3
NC_013739:717352:7297407297407343354596Conexibacter woesei DSM 14684, complete genomeYD repeat protein9e-0757.8
NC_014151:3797861:3812394381239438201517758Cellulomonas flavigena DSM 20109 chromosome, complete genomeYD repeat protein4e-0655.8
NC_014666:5449884:5459519545951954663496831Frankia sp. EuI1c chromosome, complete genomeYD repeat protein4e-0655.5