Pre_GI: BLASTP Hits

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Query: NC_009456:998935:1012862 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 1012862, End: 1014493, Length: 1632

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:242760:2464762464762481071632Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein01092
NC_013892:992811:1014091101409110157371647Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-97355
NC_006511:2677964:2699408269940827011081701Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene5e-97355
NC_004129:2034500:2046050204605020472221173Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-44179
NC_011883:303980:3061613061613072431083Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Gp5 domain protein4e-38159
NC_008751:1736512:1747426174742617485051080Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeGp5 domain protein5e-38159
NC_009654:615504:6301926301926312861095Marinomonas sp. MWYL1, complete genomehypothetical protein4e-36153
NC_009654:615504:631277631277631969693Marinomonas sp. MWYL1, complete genomehypothetical protein1e-32141
NC_016602:2586044:259959525995952600284690Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein8e-31135
NC_008751:1736512:174849017484901749176687Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein4e-28126
NC_011883:303980:305475305475306176702Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein4e-24113
NC_007005:5825925:583441858344185834795378Pseudomonas syringae pv. syringae B728a, complete genomeunnamed protein product; similar to bacteriophage protein9e-21102
NC_007005:5825925:583382458338245834417594Pseudomonas syringae pv. syringae B728a, complete genomeconserved hypothetical bacteriophage protein5e-1892.8
NC_016602:2586044:259890925989092599520612Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein9e-1685.5
NC_008027:5533311:554148355414835541782300Pseudomonas entomophila L48, complete genomehypothetical protein9e-1168.9
NC_008027:5533311:554180755418075542115309Pseudomonas entomophila L48, complete genomehypothetical protein2e-0757.8