Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:521519:526823 Shewanella loihica PV-4, complete genome

Start: 526823, End: 527494, Length: 672

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:2125403:214634121463412146985645Serratia sp. AS12 chromosome, complete genomepentapeptide repeat protein2e-37155
NC_015567:2125415:214635321463532146997645Serratia sp. AS9 chromosome, complete genomepentapeptide repeat protein2e-37155
NC_016628:935420:950111950111950383273Vibrio furnissii NCTC 11218 chromosome 2, complete sequencepentapeptide repeat-containing protein2e-1789
NC_013530:423540:423540423540424115576Xylanimonas cellulosilytica DSM 15894, complete genomepentapeptide repeat protein2e-1479.3
NC_016641:2394628:241582424158242416429606Paenibacillus terrae HPL-003 chromosome, complete genomepentapeptide repeat-containing protein3e-1375.5
NC_016641:1148220:116637511663751166983609Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein4e-1271.6
NC_014834:3130715:317497831749783175799822Rhodopseudomonas palustris DX-1 chromosome, complete genomepentapeptide repeat-containing protein1e-1170.1
NC_003552:2318374:2330272233027223319541683Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1169.3
NC_014210:2638773:265437026543702655101732Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,pentapeptide repeat protein5e-1168.2
NC_012988:1130227:113817411381741138974801Methylobacterium extorquens DM4, complete genomehypothetical protein5e-1168.2
NC_019748:1846500:185079818507981851457660Stanieria cyanosphaera PCC 7437, complete genomepentapeptide repeat protein7e-1167.4
NC_010505:5077162:509017850901785090978801Methylobacterium radiotolerans JCM 2831, complete genomepentapeptide repeat protein9e-1167
NC_015656:1469501:1481584148158414829001317Frankia symbiont of Datisca glomerata chromosome, complete genomepentapeptide repeat-containing protein1e-1066.6
NC_007759:512477:5167495167495180741326Syntrophus aciditrophicus SB, complete genomepentapeptide repeat protein2e-1066.2
NC_016935:4367000:4369906436990643718491944Paenibacillus mucilaginosus 3016 chromosome, complete genomepentapeptide repeat-containing protein2e-1066.2
NC_014622:5378000:539812353981235398731609Paenibacillus polymyxa SC2 chromosome, complete genomepentapeptide repeat-containing protein4e-1064.7
NC_014931:2336465:233646523364652337154690Variovorax paradoxus EPS chromosome, complete genomepentapeptide repeat protein6e-1064.3
NC_009925:5737000:573763457376345738257624Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein2e-0962.4
NC_002939:2617037:263988126398812640645765Geobacter sulfurreducens PCA, complete genomepentapeptide repeat domain protein3e-0962
NC_009654:615504:6289616289616301211161Marinomonas sp. MWYL1, complete genomepentapeptide repeat-containing protein4e-0961.6
NC_010067:171053:1806711806711817261056Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0960.8
NC_010170:1661915:1675162167516216762111050Bordetella petrii, complete genomehypothetical protein7e-0960.8
NC_009921:5531972:5541797554179755430471251Frankia sp. EAN1pec, complete genomepentapeptide repeat protein7e-0960.8
NC_011884:1541256:154345615434561544343888Cyanothece sp. PCC 7425, complete genomepentapeptide repeat protein9e-0960.5
NC_009927:253250:2585362585362601431608Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein1e-0860.5
NC_015416:2864917:2864917286491728677782862Methanosaeta concilii GP-6 chromosome, complete genomepentapeptide repeat-containing protein2e-0859.7
NC_013722:1689125:175102617510261751628603Xanthomonas albilineans, complete genomemcbg like protein; putative albicidin resistance2e-0859.7
NC_011149:2829811:2835265283526528363171053Salmonella enterica subsp. enterica serovar Agona str. SL483,effector protein pipB21e-0859.7
NC_015976:2064387:207236920723692073097729Sphingobium sp. SYK-6, complete genomehypothetical protein3e-0858.5
NC_012962:1364638:1371030137103013735042475Photorhabdus asymbiotica, complete genomehypothetical protein4e-0858.2
NC_019964:3028469:3034568303456830364721905Halovivax ruber XH-70, complete genomeputative low-complexity protein5e-0857.8
NC_011080:2897977:2903442290344229045421101Salmonella enterica subsp. enterica serovar Newport str. SL254,effector protein pipB26e-0857.8
NC_008312:409830:4178494178494209503102Trichodesmium erythraeum IMS101, complete genomepentapeptide repeat8e-0857.4
NC_009380:336024:341384341384342175792Salinispora tropica CNB-440 chromosome, complete genomepentapeptide repeat-containing protein7e-0857.4
NC_017093:2357583:236116723611672361754588Actinoplanes missouriensis 431, complete genomehypothetical protein7e-0857.4
NC_005125:2107088:212292221229222123746825Gloeobacter violaceus PCC 7421, complete genomehypothetical protein9e-0857
NC_012779:610509:6295816295816308971317Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-0857
NC_008576:2710500:26871822687182273193244751Magnetococcus sp. MC-1, complete genomeputative outer membrane adhesin like proteiin1e-0756.6
NC_015663:4129685:4132881413288141354212541Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-0756.2
NC_020064:4751097:4755751475575147582912541Serratia marcescens FGI94, complete genomeuncharacterized low-complexity protein2e-0756.2
NC_007626:1038214:1060439106043910620671629Magnetospirillum magneticum AMB-1, complete genomeUncharacterized low-complexity protein2e-0756.2
NC_013037:1015210:102602410260241026668645Dyadobacter fermentans DSM 18053, complete genomepentapeptide repeat protein2e-0755.8
NC_015948:2704046:2713137271313727144531317Haloarcula hispanica ATCC 33960 chromosome chromosome I, completehypothetical protein3e-0755.5
NC_009925:5737000:573826157382615739160900Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein3e-0755.5
NC_014965:1428902:1503902150390215059712070Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein3e-0755.5
NC_016626:1781956:1794926179492617971812256Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein2e-0755.5
NC_005125:2269343:227409522740952274931837Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-0755.1
NC_010546:4786000:4788229478822947893321104Cyanothece sp. ATCC 51142 chromosome circular, complete sequencerfrA family pentapeptide repeat4e-0755.1
NC_016857:2943912:2949378294937829504901113Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74effector protein pipB25e-0754.7
NC_017046:2943929:2948119294811929492311113Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-0754.7
NC_003197:2894344:2926802292680229278541053Salmonella typhimurium LT2, complete genomesecreted effector protein5e-0754.7
NC_016810:2943912:2949378294937829504301053Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0754.7
NC_016856:2896630:2947037294703729480891053Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein5e-0754.7
NC_016860:2917910:2950368295036829514201053Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein5e-0754.7
NC_015167:1701118:170527217052721705841570Cellulophaga lytica DSM 7489 chromosome, complete genomepentapeptide repeat protein7e-0754.3
NC_018750:4333064:435787143578714358545675Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein7e-0754.3
NC_009927:253250:2564332564332576261194Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencepentapeptide repeat protein6e-0754.3
NC_020064:4751097:4754684475468447557541071Serratia marcescens FGI94, complete genomeputative low-complexity protein6e-0754.3
NC_016863:2844883:2895290289529028963421053Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein6e-0754.3
NC_014391:4617688:463064646306464631278633Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepentapeptide repeat protein8e-0753.9
NC_014972:1126426:1127079112707911293432265Desulfobulbus propionicus DSM 2032 chromosome, complete genomepentapeptide repeat-containing protein9e-0753.9
NC_009052:4437649:444095244409524441614663Shewanella baltica OS155, complete genomepentapeptide repeat protein1e-0653.5
NC_009665:593359:607811607811608488678Shewanella baltica OS185 chromosome, complete genomepentapeptide repeat-containing protein1e-0653.5
NC_010511:3947948:3962914396291439641611248Methylobacterium sp. 4-46 chromosome, complete genomepentapeptide repeat-containing protein1e-0653.5
NC_011094:2791719:2833929283392928350291101Salmonella enterica subsp. enterica serovar Schwarzengrund streffector protein pipB21e-0653.5
NC_016816:1852659:1852659185265918551992541Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-0653.5
NC_011832:820658:896007896007896879873Candidatus Methanosphaerula palustris E1-9c, complete genomepentapeptide repeat protein1e-0653.1
NC_003198:2769449:2779866277986627809181053Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-0653.1
NC_004631:2755306:2765723276572327667751053Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-0653.1
NC_000911:1284552:130066113006611301656996Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.1
NC_017277:1283477:129947812994781300473996Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.1
NC_016832:2743801:2753022275302227541071086Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein pipB21e-0653.1
NC_017052:1283720:129972112997211300671951Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-0652.8
NC_017039:1283732:129973312997331300683951Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-0652.8
NC_009925:5794495:581047758104775811361885Acaryochloris marina MBIC11017, complete genomepentapeptide repeat protein2e-0652.8
NC_015711:7471500:7489949748994974909561008Myxococcus fulvus HW-1 chromosome, complete genomepentapeptide repeat-containing protein2e-0652.8
NC_016641:2394628:241517324151732415811639Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-0652.4
NC_016831:2779864:2789091278909127901911101Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-0652
NC_007298:750361:754988754988755635648Dechloromonas aromatica RCB, complete genomePentapeptide repeat3e-0652
NC_011884:5019500:505406650540665054563498Cyanothece sp. PCC 7425, complete genomepentapeptide repeat protein3e-0652
NC_003143:524755:5455155455155471371623Yersinia pestis CO92, complete genomehypothetical protein4e-0651.6
NC_012440:1080675:110022611002261100858633Persephonella marina EX-H1, complete genomepentapeptide repeat protein4e-0651.6
NC_012125:2826624:2862018286201828631301113Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0651.6
NC_006905:2857699:2881486288148628825381053Salmonella enterica subsp. enterica serovar Choleraesuis strHomolog of pipB, putative pentapeptide repeats (8 copies)4e-0651.6
NC_011294:2802502:2811728281172828127801053Salmonella enterica subsp. enterica serovar Enteritidis strexported protein4e-0651.6
NC_011083:2847318:2901312290131229024121101Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,effector protein pipB24e-0651.6
NC_010102:2881714:2890943289094328920431101Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0651.6
NC_011205:2962270:2971495297149529725951101Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853effector protein pipB24e-0651.6
NC_014659:3654979:365916136591613659775615Rhodococcus equi 103S, complete genomehypothetical protein5e-0651.2
NC_012804:903539:9148589148589159851128Thermococcus gammatolerans EJ3, complete genomeVoltage-gated potassium channel, putative6e-0651.2