Pre_GI: BLASTP Hits

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Query: NC_009092:4585784:4588736 Shewanella loihica PV-4, complete genome

Start: 4588736, End: 4589518, Length: 783

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:79282:113187113187113936750Methylobacterium nodulans ORS 2060, complete genomeubiquinone biosynthesis O-methyltransferase3e-58224
NC_015380:99919:117514117514118242729Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase5e-58224
NC_007205:499808:504209504209504931723Candidatus Pelagibacter ubique HTCC1062, complete genomeprobable 3-demethylubiquinone-9 3-O-methyltransferase3e-57221
NC_018643:1037456:105849210584921059214723Alpha proteobacterium HIMB5 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase1e-53209
NC_011985:3282924:330826633082663309012747Agrobacterium radiobacter K84 chromosome 1, complete genome3-demethylubiquinone-9 3-methyltransferase protein3e-53208
NC_002927:3716894:372060537206053721378774Bordetella bronchiseptica RB50, complete genome3-demethylubiquinone-9 3-methyltransferase4e-48191
NC_014774:995000:101654810165481017309762Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete3-demethylubiquinone-9 3-methyltransferase2e-46185
NC_007404:974461:100643910064391007137699Thiobacillus denitrificans ATCC 25259, complete genome3-demethylubiquinone-9 3-methyltransferase3e-45182
NC_010524:1005355:102122110212211021928708Leptothrix cholodnii SP-6, complete genomeubiquinone biosynthesis O-methyltransferase3e-44178
NC_014315:2327083:233100023310002331731732Nitrosococcus watsoni C-113 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase8e-43174
NC_010278:315941:317627317627318364738Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,3-demethylubiquinone-9 3-methyltransferase1e-42173
NC_010939:321492:322552322552323256705Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3-demethylubiquinone-9 3-methyltransferase2e-42172
NC_015731:2811579:281293028129302813637708Nitrosomonas sp. Is79A3 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase2e-42172
NC_012108:1664341:166805016680501668748699Desulfobacterium autotrophicum HRM2, complete genomeUbiG4e-42171
NC_009053:313779:314720314720315424705Actinobacillus pleuropneumoniae L20, complete genome3-demethylubiquinone-9 3-methyltransferase8e-42170
NC_009654:3215205:324053332405333241255723Marinomonas sp. MWYL1, complete genomeubiquinone biosynthesis O-methyltransferase1e-41170
NC_009901:2485965:250207425020742502784711Shewanella pealeana ATCC 700345, complete genomeubiquinone biosynthesis O-methyltransferase2e-40166
NC_008782:2568027:261920526192052619918714Acidovorax sp. JS42, complete genomeubiquinone biosynthesis O-methyltransferase3e-40165
NC_014910:1912552:191615819161581916871714Alicycliphilus denitrificans BC chromosome, complete genomeubiquinone biosynthesis o-methyltransferase3e-40165
NC_015422:2078618:208461920846192085332714Alicycliphilus denitrificans K601 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase3e-40165
NC_008781:2925818:293162429316242932340717Polaromonas naphthalenivorans CJ2, complete genomeubiquinone biosynthesis O-methyltransferase1e-39163
NC_008752:3595516:362265936226593623375717Acidovorax avenae subsp. citrulli AAC00-1, complete genomeubiquinone biosynthesis O-methyltransferase5e-39161
NC_013364:2898964:292303529230352923757723Escherichia coli O111:H- str. 11128, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase UbiG5e-39161
NC_014311:2606434:260572126057212606437717Ralstonia solanacearum PSI07 chromosome, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase4e-39161
NC_013716:2476334:247633424763342477062729Citrobacter rodentium ICC168, complete genome3-demethylubiquinone-9 3-methyltransferase2e-38159
NC_010804:996837:104203410420341042732699Burkholderia multivorans ATCC 17616 chromosome 1, complete3-demethylubiquinone-9 3-methyltransferase7e-38157
NC_008390:987052:100458010045801005278699Burkholderia cepacia AMMD chromosome 1, complete sequenceubiquinone biosynthesis O-methyltransferase2e-37155
NC_005061:524704:527499527499528236738Candidatus Blochmannia floridanus, complete genome3-demethylubiquinone-9 3-methyltransferase1e-35150
NC_007798:547800:550420550420551112693Neorickettsia sennetsu str. Miyayama, complete genome3-demethylubiquinone-9 3-methyltransferase3e-35148
NC_013009:562470:565089565089565781693Neorickettsia risticii str. Illinois, complete genome3-demethylubiquinone-9 3-methyltransferase1e-33143
NC_020911:4428000:443902044390204439730711Octadecabacter antarcticus 307, complete genome3-demethylubiquinone-9 3-methyltransferase UbiG3e-24112
NC_020911:3475096:347509634750963475815720Octadecabacter antarcticus 307, complete genome3-demethylubiquinone-9 3-methyltransferase UbiG2e-22106
NC_008209:695269:711927711927712547621Roseobacter denitrificans OCh 114, complete genome3-demethylubiquinone-9 3-methyltransferase3e-1892.4
NC_009921:5202607:523904652390465239843798Frankia sp. EAN1pec, complete genomeMethyltransferase type 113e-1169.3
NC_007677:771168:806019806019806651633Salinibacter ruber DSM 13855, complete genomemethyltransferase domain protein8e-1167.8
NC_015573:2040500:205804620580462058735690Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometype 11 methyltransferase3e-1065.9
NC_007355:544796:558137558137558889753Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceubiquinone/menaquinone biosynthesis methyltransferase5e-1065.1
NC_007802:1991211:202540220254022026187786Jannaschia sp. CCS1, complete genomeMethyltransferase type 111e-0963.9
NC_012804:1940500:194050519405051941191687Thermococcus gammatolerans EJ3, complete genomeSAM-dependent methyltransferase, ubiE/COQ5 family4e-0962
NC_016884:2194419:2218823221882322198961074Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype 11 methyltransferase1e-0860.8
NC_015757:1329012:1331129133112913321541026Sulfobacillus acidophilus TPY chromosome, complete genomeglycosyl transferase family 29e-0960.8
NC_014507:245344:263605263605264447843Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase2e-0859.7
NC_012881:964823:973356973356974234879Desulfovibrio salexigens DSM 2638, complete genomeMethyltransferase type 122e-0859.7
NC_006513:2526843:253340825334082534244837Azoarcus sp. EbN1, complete genomeprobable methyltransferase3e-0858.9
NC_013730:5989387:600832260083226009320999Spirosoma linguale DSM 74, complete genomeMethyltransferase type 114e-0858.9
NC_016751:1979201:199973819997382000439702Marinitoga piezophila KA3 chromosome, complete genomemethylase5e-0858.5
NC_019940:1059000:108799410879941088734741Thioflavicoccus mobilis 8321 chromosome, complete genomemethyltransferase family protein1e-0757.4
NC_006624:2016000:203209420320942032780687Thermococcus kodakarensis KOD1, complete genomeSAM-dependent methyltransferase, UbiE/COQ5 family1e-0757.4
NC_016887:1949927:196165319616531962351699Nocardia cyriacigeorgica GUH-2, complete genomeputative methyltransferase1e-0757.4
NC_007517:2451547:2460081246008124611181038Geobacter metallireducens GS-15, complete genomeMethylase involved in ubiquinone/menaquinone biosynthesis-like1e-0757
NC_009706:2673906:269039326903932691133741Clostridium kluyveri DSM 555 chromosome, complete genomemethyltransferase2e-0756.6
NC_011837:2605409:262189626218962622636741Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0756.6
NC_014507:906960:906960906960907724765Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase2e-0756.6
NC_011898:3367457:336745733674573368197741Clostridium cellulolyticum H10, complete genomeMethyltransferase type 111e-0756.6
NC_004631:4687270:4702025470202547036531629Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0756.2
NC_006905:4638707:4662789466278946644201632Salmonella enterica subsp. enterica serovar Choleraesuis strputative SAM-dependent methyltransferase2e-0756.2
NC_011149:4677412:4710823471082347124481626Salmonella enterica subsp. enterica serovar Agona str. SL483,methyltransferase domain family2e-0756.2
NC_011147:4460726:4491596449159644932211626Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0756.2
NC_007347:767455:7774837774837808033321Ralstonia eutropha JMP134 chromosome 1, complete sequenceGlycosyl transferase, family 2:Glycosyl transferase, group 12e-0756.2
NC_010102:4745949:4759504475950447611291626Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0756.2
NC_011205:4718239:4739999473999947416241626Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853SAM-dependent methyltransferase3e-0755.8
NC_011294:4560902:4582673458267345843041632Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0755.8
NC_015856:940625:969089969089969964876Collimonas fungivorans Ter331 chromosome, complete genomeputative glycosyltransferase3e-0755.8
NC_016935:1868839:190555019055501906284735Paenibacillus mucilaginosus 3016 chromosome, complete genometype 11 methyltransferase3e-0755.8
NC_011274:4538722:4560491456049145621221632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0755.8
NC_013730:3137391:315058331505833151362780Spirosoma linguale DSM 74, complete genomeMethyltransferase type 114e-0755.5
NC_014210:1625954:163627816362781637036759Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Methyltransferase type 114e-0755.1
NC_015556:4074367:4083691408369140847341044Pseudomonas fulva 12-X chromosome, complete genomeMethyltransferase type 115e-0755.1
NC_014666:2629799:263976726397672640618852Frankia sp. EuI1c chromosome, complete genomeMethyltransferase type 117e-0754.7
NC_007645:2294553:229903322990332299827795Hahella chejuensis KCTC 2396, complete genomeSAM-dependent methyltransferase6e-0754.7
NC_011080:4703266:4724514472451447261391626Salmonella enterica subsp. enterica serovar Newport str. SL254,putative SAM-dependent methyltransferase8e-0754.3
NC_020541:1014176:1024159102415910252411083Rhodanobacter sp. 2APBS1, complete genomemethyltransferase family protein8e-0754.3
NC_013959:2892660:289377728937772894763987Sideroxydans lithotrophicus ES-1 chromosome, complete genomeMethyltransferase type 111e-0653.9
NC_017506:2993679:299915229991522999862711Marinobacter adhaerens HP15 chromosome, complete genomemethyltransferase2e-0653.5
NC_016641:1530905:154436315443631545133771Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-0653.5
NC_009635:518000:530478530478531110633Methanococcus aeolicus Nankai-3 chromosome, complete genomemethyltransferase type 112e-0653.1
NC_009442:908507:927674927674928408735Streptococcus suis 05ZYH33 chromosome, complete genomehypothetical protein2e-0653.1
NC_006663:1:100551005510789735Staphylococcus epidermidis RP62A plasmid pSERP, complete sequencemethyltransferase, UbiE/COQ5 family2e-0653.1
NC_013093:3791912:380528438052843806099816Actinosynnema mirum DSM 43827, complete genomeMethyltransferase type 112e-0653.1
NC_009483:3544333:355358235535823554580999Geobacter uraniireducens Rf4 chromosome, complete genometype 12 methyltransferase3e-0652.8
NC_009663:946285:9534679534679547861320Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-0652.8
NC_009925:4864367:486436748643674865353987Acaryochloris marina MBIC11017, complete genomecyclopropane-fatty-acyl-phospholipid synthase3e-0652.4
NC_017030:4146937:415407241540724154809738Corallococcus coralloides DSM 2259 chromosome, complete genomemethyltransferase4e-0652
NC_003552:4782635:480040848004084801163756Methanosarcina acetivorans C2A, complete genomeubiE/COQ5 methyltransferase5e-0652
NC_015673:1794590:181610218161021816701600Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein5e-0651.6
NC_014378:131810:136679136679137287609Acetohalobium arabaticum DSM 5501 chromosome, complete genomeMethyltransferase type 115e-0651.6
NC_015388:1861710:187093218709321871660729Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeMethyltransferase type 125e-0651.6
NC_003901:2626426:2634042263404226381844143Methanosarcina mazei Go1, complete genomeputative glycosyltransferase9e-0650.8
NC_014622:5683400:568701356870135687777765Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein9e-0650.8
NC_008536:2717891:2724919272491927264451527Solibacter usitatus Ellin6076, complete genomeglycosyl transferase, family 29e-0650.8