Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2910241 Shewanella loihica PV-4, complete genome

Start: 2910241, End: 2910645, Length: 405

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011663:3181579:318345131834513183855405Shewanella baltica OS223 chromosome, complete genomebiopolymer transport protein ExbD/TolR1e-63241
NC_008577:3125675:312811131281113128515405Shewanella sp. ANA-3 chromosome 1, complete sequenceBiopolymer transport protein ExbD/TolR2e-63240
NC_008322:2983951:298829729882972988701405Shewanella sp. MR-7, complete genomeBiopolymer transport protein ExbD/TolR2e-63240
NC_008321:2922000:292447329244732924877405Shewanella sp. MR-4, complete genomeBiopolymer transport protein ExbD/TolR2e-63240
NC_009052:1899954:192236319223631922767405Shewanella baltica OS155, complete genomeBiopolymer transport protein ExbD/TolR4e-63239
NC_014012:3356629:335725133572513357661411Shewanella violacea DSS12, complete genomeTonB system transport protein ExbD21e-62238
NC_014541:1280835:129824212982421298646405Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein ExbD7e-51198
NC_008228:3608909:361078436107843611185402Pseudoalteromonas atlantica T6c, complete genomeBiopolymer transport protein ExbD/TolR3e-38156
NC_014315:2659479:267831626783162678726411Nitrosococcus watsoni C-113 chromosome, complete genomebiopolymer transport protein ExbD/TolR1e-30131
NC_020409:77414:792397923979649411Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeBiopolymer transport protein exbD26e-29125
NC_006138:3355028:336199833619983362402405Desulfotalea psychrophila LSv54, complete genomebiopolymer transport protein (ExbD2)3e-27120
NC_014761:1321187:134156413415641341959396Oceanithermus profundus DSM 14977 chromosome, complete genomebiopolymer transport protein exbd/tolr5e-1683.2
NC_011026:2269986:228250722825072283007501Chloroherpeton thalassium ATCC 35110, complete genomeBiopolymer transport protein ExbD/TolR2e-1271.2
NC_000911:15937:325243252432952429Synechocystis sp. PCC 6803, complete genomebiopolymer transport protein5e-1269.7
NC_017039:15937:325243252432952429Synechocystis sp. PCC 6803 substr. PCC-P, complete genomebiopolymer transport ExbD protein5e-1269.7
NC_017052:15937:325243252432952429Synechocystis sp. PCC 6803 substr. PCC-N, complete genomebiopolymer transport ExbD protein5e-1269.7
NC_017277:15937:325243252432952429Synechocystis sp. PCC 6803, complete genomebiopolymer transport ExbD protein5e-1269.7
NC_011296:909558:929488929488929892405Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolR protein1e-1168.9
NC_008011:860000:873921873921874355435Lawsonia intracellularis PHE/MN1-00, complete genomeBiopolymer transport protein5e-1166.2
NC_019940:3480690:350226135022613502650390Thioflavicoccus mobilis 8321 chromosome, complete genomebiopolymer transport protein8e-1165.9
NC_013520:1936209:195357719535771953981405Veillonella parvula DSM 2008, complete genomeBiopolymer transport protein ExbD/TolR1e-1064.7
NC_015185:792933:794814794814795242429Desulfurobacterium thermolithotrophum DSM 11699 chromosome,Biopolymer transport protein ExbD/TolR3e-1063.9
NC_013520:91961:113611113611114015405Veillonella parvula DSM 2008, complete genomeBiopolymer transport protein ExbD/TolR4e-1063.5
NC_003902:2469500:250536925053692505806438Xanthomonas campestris pv. campestris str. ATCC 33913, completebiopolymer transport protein7e-1062.8
NC_011761:2031876:204989520498952050269375Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeExbD/TolR family biopolymer transport protein1e-0962
NC_011206:1917408:193541219354121935801390Acidithiobacillus ferrooxidans ATCC 53993, complete genomeBiopolymer transport protein ExbD/TolR1e-0962
NC_015276:2171355:217446821744682174890423Marinomonas mediterranea MMB-1 chromosome, complete genomeBiopolymer transport protein ExbD/TolR2e-0961.2
NC_012660:4149487:416806741680674168495429Pseudomonas fluorescens SBW25 chromosome, complete genomebiopolymer transport protein3e-0960.8
NC_007404:387827:389505389505389912408Thiobacillus denitrificans ATCC 25259, complete genomebiopolymer transport protein, ExbD/TolR family3e-0960.5
NC_008781:3056407:307737830773783077812435Polaromonas naphthalenivorans CJ2, complete genomeBiopolymer transport protein ExbD/TolR6e-0959.7
NC_003919:2435058:243459724345972435061465Xanthomonas axonopodis pv. citri str. 306, complete genomebiopolymer transport protein6e-0959.3
NC_002977:2407392:242890124289012429305405Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family1e-0858.5
NC_011138:831585:835683835683835877195Alteromonas macleodii 'Deep ecotype', complete genomeTonB system transport protein ExbD25e-0856.6
NC_015638:1885041:190542119054211905813393Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeBiopolymer transport protein ExbD/TolR6e-0856.2
NC_015851:181721:185957185957186355399Acidithiobacillus caldus SM-1 megaplasmid, complete sequencebiopolymer transport protein ExbD/TolR9e-0855.5
NC_016147:1788219:178821917882191788698480Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebiopolymer transport protein1e-0755.1
NC_002929:3568106:356810635681063568564459Bordetella pertussis Tohama I, complete genomeputative TolR-like translocation protein1e-0755.1
NC_015501:556994:577422577422577871450Porphyromonas asaccharolytica DSM 20707 chromosome, completeBiopolymer transport protein ExbD/TolR2e-0754.7
NC_012440:373863:380844380844381248405Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD2e-0754.3
NC_002977:652481:668848668848669273426Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family3e-0753.9
NC_016024:156000:161382161382161813432Candidatus Chloracidobacterium thermophilum B chromosome chromosomebiopolymer transport protein3e-0753.9
NC_013446:3209000:322579332257933226224432Comamonas testosteroni CNB-2, complete genomeBiopolymer transport protein ExbD/TolR3e-0753.9
NC_004757:230541:250127250127250543417Nitrosomonas europaea ATCC 19718, complete genomeBiopolymer transport protein ExbD/TolR5e-0753.1
NC_012440:1874896:187450118745011874899399Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD/TolR5e-0753.1
NC_011761:684969:696141696141696539399Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeExbD/TolR family biopolymer transport protein9e-0752.4
NC_011206:863987:875159875159875557399Acidithiobacillus ferrooxidans ATCC 53993, complete genomeBiopolymer transport protein ExbD/TolR9e-0752.4
NC_013209:2414500:242392024239202424369450Acetobacter pasteurianus IFO 3283-01, complete genomeExbD/TolR1e-0652
NC_017100:2414075:242512724251272425576450Acetobacter pasteurianus IFO 3283-03, complete genomeExbD/TolR1e-0652
NC_017108:2413000:242246424224642422913450Acetobacter pasteurianus IFO 3283-12, complete genomeExbD/TolR1e-0652
NC_017111:2413000:242248224224822422931450Acetobacter pasteurianus IFO 3283-32, complete genomeExbD/TolR1e-0652
NC_017121:2413000:242246924224692422918450Acetobacter pasteurianus IFO 3283-07, complete genomeExbD/TolR1e-0652
NC_017125:2415500:242510724251072425556450Acetobacter pasteurianus IFO 3283-22, complete genomeExbD/TolR1e-0652
NC_017146:2416000:242514924251492425598450Acetobacter pasteurianus IFO 3283-26, complete genomeExbD/TolR1e-0652
NC_014008:354292:356113356113356520408Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeBiopolymer transport protein ExbD/TolR1e-0651.6
NC_014394:2765261:278552127855212785928408Gallionella capsiferriformans ES-2 chromosome, complete genomeprotein TolR1e-0651.6
NC_008800:3955284:397258139725813973006426Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,biopolymer transport protein ExbD1e-0651.6
NC_015726:2817352:283644228364422836885444Cupriavidus necator N-1 chromosome 1, complete sequencebiopolymer transport protein ExbD2e-0650.8
NC_010634:3905369:392659939265993927030432Yersinia pseudotuberculosis PB1/+, complete genomeTonB system transport protein ExbD4e-0650.4
NC_002516:1031386:105456610545661055006441Pseudomonas aeruginosa PAO1, complete genomeTolR protein3e-0650.4
NC_011770:4763506:478338547833854783825441Pseudomonas aeruginosa LESB58, complete genomeTolR protein3e-0650.4
NC_008463:4566976:459652945965294596969441Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolR protein3e-0650.4
NC_018080:4465618:448459944845994485039441Pseudomonas aeruginosa DK2 chromosome, complete genomeTolR protein3e-0650.4
NC_014315:114151:138951138951139397447Nitrosococcus watsoni C-113 chromosome, complete genomeprotein TolR4e-0650.1
NC_014008:354292:356520356520356954435Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeBiopolymer transport protein ExbD/TolR8e-0649.3
NC_014323:3195178:321381532138153214234420Herbaspirillum seropedicae SmR1 chromosome, complete genomebiopolymer transport ExbD/TolR protein8e-0648.9