Pre_GI: BLASTP Hits

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Query: NC_009092:1989977:2006941 Shewanella loihica PV-4, complete genome

Start: 2006941, End: 2007951, Length: 1011

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:2427291:2449309244930924503251017Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/formation protein HypE6e-156550
NC_010334:2749250:2753864275386427548801017Shewanella halifaxensis HAW-EB4, complete genomehydrogenase expression/formation protein HypE1e-154546
NC_007575:1484305:149058614905861491584999Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/formation protein HypE4e-111401
NC_017192:1841987:185093118509311851929999Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypE5e-103374
NC_020411:28995:438594385944845987Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein, carbamoyl dehydratase HypE4e-93341
NC_015587:28997:438614386144847987Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase expression/formation protein HypE4e-93341
NC_015557:30622:438254382544811987Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase expression/formation protein HypE4e-93341
NC_003272:784437:8048908048908059931104Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein5e-88324
NC_007413:5742406:5761449576144957625521104Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/formation protein HypE1e-87323
NC_013921:1614397:161845516184551619444990Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase expression/formation protein HypE3e-87322
NC_015958:141500:151192151192152181990Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase expression/formation protein HypE1e-86320
NC_014209:1580423:158442915844291585418990Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase expression/formation protein HypE3e-85315
NC_021182:1761789:1775857177585717768641008Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypE1e-84313
NC_021182:1983456:1997205199720519982121008Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypE1e-84313
NC_015555:114977:126282126282127271990Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase expression/formation protein HypE3e-84311
NC_014328:2518081:2528861252886125298651005Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrogenase expression/formation protein HypE4e-84311
NC_016627:1133759:114743411474341148432999Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase expression/formation protein HypE3e-82305
NC_010001:2125500:214159521415952142572978Clostridium phytofermentans ISDg, complete genomehydrogenase expression/formation protein HypE1e-81303
NC_013730:4636575:4652564465256446535981035Spirosoma linguale DSM 74, complete genomehydrogenase expression/formation protein HypE4e-81301
NC_013161:2804228:2825563282556328266091047Cyanothece sp. PCC 8802, complete genomehydrogenase expression/formation protein HypE7e-81300
NC_011898:513835:5339705339705349831014Clostridium cellulolyticum H10, complete genomehydrogenase expression/formation protein HypE4e-80298
NC_013222:229190:2461042461042471231020Robiginitalea biformata HTCC2501, complete genomeHydrogenase expression/formation protein HypE6e-79294
NC_009801:3013838:3016445301644530174551011Escherichia coli E24377A, complete genomehydrogenase expression/formation protein HypE4e-78291
NC_009937:673820:6776816776816787481068Azorhizobium caulinodans ORS 571, complete genomehydrogenase expression/formation protein5e-78291
NC_008253:2828573:2830826283082628318361011Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HypE5e-78291
NC_014926:875948:880435880435881424990Thermovibrio ammonificans HB-1 chromosome, complete genomehydrogenase expression/formation protein HypE3e-77288
NC_010336:852915:8654298654298664541026Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein HypE2e-75282
NC_010067:84093:1100811100811110911011Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-75281
NC_012483:3529895:3538925353892535400491125Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypE4e-74278
NC_007626:1746475:1776475177647517775241050Magnetospirillum magneticum AMB-1, complete genomeHydrogenase expression/formation protein hypE7e-73274
NC_008340:2272692:2287541228754122885931053Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase expression/formation protein HypE2e-72272
NC_015185:875324:896785896785897774990Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hydrogenase expression/formation protein HypE3e-72271
NC_010278:1467146:147315114731511474092942Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase maturation factor4e-70265
NC_013887:1462918:1476310147631014773171008Methanocaldococcus sp. FS406-22 chromosome, complete genomehydrogenase expression/formation protein HypE6e-70264
NC_013156:573037:5884705884705894771008Methanocaldococcus fervens AG86, complete genomehydrogenase expression/formation protein HypE1e-69263
NC_000909:597692:6020816020816030881008Methanocaldococcus jannaschii DSM 2661, complete genomehydrogenase expression/formation protein (hypE)4e-69261
NC_011296:530408:535105535105536103999Thermodesulfovibrio yellowstonii DSM 11347, complete genomehydrogenase expression/formation protein HypE9e-69260
NC_017273:352150:3742303742303752641035Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase expression/formation protein HypE8e-69260
NC_011666:3001513:3017723301772330187721050Methylocella silvestris BL2, complete genomehydrogenase expression/formation protein HypE3e-68259
NC_015499:1097432:1104638110463811056481011Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase expression/formation protein HypE4e-68258
NC_004463:1898648:1901529190152919025751047Bradyrhizobium japonicum USDA 110, complete genomehydrogenase expression/formation protein1e-66253
NC_019942:987134:104506210450621046057996Aciduliprofundum sp. MAR08-339, complete genomehydrogenase expression/formation protein HypE3e-63242
NC_015565:348941:3711823711823721921011Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase expression/formation protein HypE4e-62238
NC_008698:1556223:1558551155855115596121062Thermofilum pendens Hrk 5, complete genomehydrogenase expression/formation protein HypE3e-54212
NC_013741:1037176:1043261104326110442951035Archaeoglobus profundus DSM 5631, complete genomehydrogenase expression/formation protein HypE2e-44179
NC_012883:695652:699517699517700506990Thermococcus sibiricus MM 739, complete genomeHydrogenase expression/formation protein HypE5e-25115
NC_008698:1612873:1613787161378716147941008Thermofilum pendens Hrk 5, complete genomeAIR synthase related protein domain protein1e-21103
NC_015519:245036:2566282566282576351008Tepidanaerobacter sp. Re1 chromosome, complete genomeThiamine-phosphate kinase2e-1790.1
NC_015958:1465631:148776114877611488756996Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeAIR synthase-like protein domain-containing protein3e-1582.8
NC_007644:711476:7264147264147280001587Moorella thermoacetica ATCC 39073, complete genomeAIR synthase related protein-like6e-1582
NC_010321:1361748:138366813836681384663996Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeAIR synthase-like protein9e-1581.3
NC_013921:1344000:136566313656631366658996Thermoanaerobacter italicus Ab9 chromosome, complete genomeAIR synthase related protein domain protein1e-1480.5
NC_014831:8965:1152711527126091083Thermaerobacter marianensis DSM 12885 chromosome, complete genomeAIR synthase related protein1e-1377.8
NC_000868:378130:378130378130379062933Pyrococcus abyssi GE5, complete genomethiamine monophosphate kinase2e-1273.9
NC_014209:1363151:138541913854191386414996Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,AIR synthase related protein domain protein3e-1272.8
NC_014654:2180994:2206595220659522075961002Halanaerobium sp. 'sapolanicus' chromosome, complete genomeAIR synthase related protein domain protein1e-1171.2
NC_002754:46297:4629746297473281032Sulfolobus solfataricus P2, complete genomeHydrogenase expression/formation protein (hypE)5e-1168.9
NC_018704:347948:364387364387365358972Amphibacillus xylanus NBRC 15112, complete genomethiamine-monophosphate kinase1e-1067.4
NC_015690:8019859:8040360804036080414091050Paenibacillus mucilaginosus KNP414 chromosome, complete genomethiamine-monophosphate kinase1e-0963.9
NC_007181:333891:335633335633336574942Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein2e-0963.5
NC_014374:318528:3195143195143205781065Acidilobus saccharovorans 345-15 chromosome, complete genomePutative hydrogenase expression/formation protein HypE7e-0961.6
NC_002528:505951:505951505951506922972Buchnera aphidicola str. APS (Acyrthosiphon pisum), completethiamin-monophosphate kinase1e-0860.8
NC_012622:1944544:196266919626691963625957Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeAIR synthase related protein domain protein2e-0860.5
NC_020272:3325000:334644833464483347425978Bacillus amyloliquefaciens IT-45, complete genomethiamine monophosphate kinase3e-0859.7
NC_012589:2006323:202336620233662024322957Sulfolobus islandicus L.S.2.15, complete genomeAIR synthase related protein4e-0859.3
NC_012588:1874242:189128618912861892242957Sulfolobus islandicus M.14.25 chromosome, complete genomeAIR synthase domain-containing protein4e-0859.3
NC_012632:1980332:199738219973821998338957Sulfolobus islandicus M.16.27 chromosome, complete genomeAIR synthase related protein domain protein4e-0859.3
NC_012726:1878503:189554718955471896503957Sulfolobus islandicus M.16.4 chromosome, complete genomeAIR synthase related protein domain protein4e-0859.3
NC_013769:1993557:201060020106002011556957Sulfolobus islandicus L.D.8.5 chromosome, complete genomeAIR synthase related protein domain protein4e-0859.3
NC_012623:663020:662098662098663054957Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeAIR synthase related protein domain protein6e-0858.9
NC_017275:1909403:192644819264481927404957Sulfolobus islandicus HVE10/4 chromosome, complete genomeAIR synthase-like protein domain1e-0757.4
NC_013158:363222:3837783837783848001023Halorhabdus utahensis DSM 12940, complete genomeAIR synthase related protein domain protein3e-0756.2
NC_014972:2328228:2330770233077023318041035Desulfobulbus propionicus DSM 2032 chromosome, complete genomethiamine-monophosphate kinase2e-0653.9
NC_017294:403422:420017420017420994978Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehydrogenase maturation factor2e-0653.5
NC_020181:2714559:275298927529892753966978Enterobacter aerogenes EA1509E, complete genomeThiamine-monophosphate kinase2e-0653.5