Pre_GI: BLASTP Hits

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Query: NC_009092:1263964:1272548 Shewanella loihica PV-4, complete genome

Start: 1272548, End: 1273534, Length: 987

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008577:3738758:375702037570203758012993Shewanella sp. ANA-3 chromosome 1, complete sequencePrepilin-type cleavage/methylation-like protein3e-138491
NC_008322:3585601:3597785359778535987861002Shewanella sp. MR-7, complete genomePrepilin-type cleavage/methylation-like protein8e-132469
NC_008321:3512471:3526893352689335279061014Shewanella sp. MR-4, complete genomePrepilin-type cleavage/methylation-like protein3e-131468
NC_008700:1115436:112186811218681122842975Shewanella amazonensis SB2B, complete genometype IV pilus assembly protein PilW4e-123441
NC_011663:3818886:383223438322343833202969Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-121436
NC_009665:1332751:133922813392281340196969Shewanella baltica OS185 chromosome, complete genometype IV pilus assembly protein PilW1e-121436
NC_009052:1211989:122009412200941221062969Shewanella baltica OS155, complete genometype IV pilus assembly protein PilW8e-122436
NC_016901:1367443:137554813755481376516969Shewanella baltica OS678 chromosome, complete genomehypothetical protein3e-121434
NC_009997:1368471:137495113749511375919969Shewanella baltica OS195, complete genometype IV pilus assembly protein PilW3e-121434
NC_004347:3670145:368215636821563683094939Shewanella oneidensis MR-1, complete genomehypothetical protein8e-119426
NC_009901:1309724:131631413163141317303990Shewanella pealeana ATCC 700345, complete genometype IV pilus assembly protein PilW7e-109393
NC_015424:3890293:390240039024003903356957Aeromonas veronii B565 chromosome, complete genomeTppC3e-37155
NC_011901:3363500:3376823337682333778481026Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-1893.6
NC_008702:2378890:2387559238755923885811023Azoarcus sp. BH72, complete genomeputative type 4 pilus biogenesis protein2e-1893.2
NC_007508:3183631:3207702320770232088591158Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomePilW-related protein1e-1377.4
NC_008740:979830:9860049860049872931290Marinobacter aquaeolei VT8, complete genomeTfp pilus assembly protein PilW-like2e-1170.1
NC_017267:2955946:2968835296883529700011167Xanthomonas oryzae pv. oryzicola BLS256 chromosome, complete3e-1169.7
NC_006834:3422985:3437218343721834383841167Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein2e-1067
NC_010717:3564955:3576850357685035780161167Xanthomonas oryzae pv. oryzae PXO99A, complete genomeprepilin-type N-terminal cleavage/methylation domain protein2e-1067
NC_007705:3429493:3441485344148534426511167Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein2e-1067
NC_007086:1936505:1946484194648419476381155Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-1065.9
NC_016147:2471451:2480075248007524811121038Pseudoxanthomonas spadix BD-a59 chromosome, complete genometype IV pilus assembly protein PilW4e-0756.2
NC_010995:3821327:3835546383554638365951050Cellvibrio japonicus Ueda107, complete genometype 4 fimbrial biogenesis protein PilW1e-0654.3
NC_012856:737170:7470117470117480451035Ralstonia pickettii 12D chromosome 1, complete genometype IV pilus assembly protein PilW2e-0653.5
NC_014153:436082:445405445405446379975Thiomonas intermedia K12 chromosome, complete genomehypothetical protein7e-0651.6
NC_015556:4118304:4126613412661341276471035Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein8e-0651.6