Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2260298 Clostridium novyi NT, complete genome

Start: 2260298, End: 2261374, Length: 1077

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1245692:1255979125597912570701092Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CbiD6e-124444
NC_014328:3482980:3491517349151734925991083Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cobalt-precorrin-6A synthase4e-117421
NC_017295:1507956:1520549152054915216341086Clostridium acetobutylicum EA 2018 chromosome, complete genomecobalt-precorrin-6A synthase3e-110398
NC_003030:1510000:1521135152113515222201086Clostridium acetobutylicum ATCC 824, complete genomecobalt-precorrin-6A synthase3e-110398
NC_015687:1508664:1522736152273615238211086Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalt-precorrin-6A synthase3e-110398
NC_004557:749330:7594747594747605531080Clostridium tetani E88, complete genomecobalt-precorrin-6A synthase2e-108392
NC_003366:1427785:1428424142842414295211098Clostridium perfringens str. 13, complete genomecobalt-precorrin-6A synthase2e-95349
NC_009633:74500:9162791627927601134Alkaliphilus metalliredigens QYMF chromosome, complete genomecobalt-precorrin-6A synthase6e-69261
NC_015565:624298:6332996332996344141116Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalt-precorrin-6A synthase4e-68258
NC_016791:1132451:1137474113747411386281155Clostridium sp. BNL1100 chromosome, complete genomecobalamin biosynthesis protein CbiD2e-64246
NC_015519:488550:4885504885504896231074Tepidanaerobacter sp. Re1 chromosome, complete genomecobalt-precorrin-6A synthase8e-64244
NC_010001:1702350:1714606171460617157631158Clostridium phytofermentans ISDg, complete genomecobalamin biosynthesis protein CbiD3e-61235
NC_011898:1558208:1574235157423515753891155Clostridium cellulolyticum H10, complete genomecobalamin biosynthesis protein CbiD1e-60233
NC_009089:3998347:4019514401951440207401227Clostridium difficile 630, complete genomecobalt-precorrin-6a synthase (deacetylating)4e-60231
NC_013316:3863728:3884918388491838861441227Clostridium difficile R20291, complete genomeputative cobalt-precorrin-6a synthase [deacetylating]1e-59230
NC_014734:3086165:3095048309504830961721125Paludibacter propionicigenes WB4 chromosome, complete genomecobalamin biosynthesis protein cbid8e-57221
NC_009253:2927802:2940108294010829412201113Desulfotomaculum reducens MI-1 chromosome, complete genomecobalt-precorrin-6A synthase2e-56219
NC_017068:1788235:1820656182065618217591104Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative cobalt-precorrin-6A synthase4e-56218
NC_016627:4203775:4223762422376242248951134Clostridium clariflavum DSM 19732 chromosome, complete genomecobalt-precorrin 5B C1-methyltransferase1e-54213
NC_013517:1055854:1094826109482610959231098Sebaldella termitidis ATCC 33386, complete genomecobalamin biosynthesis protein CbiD3e-54213
NC_013892:853366:8648758648758660381164Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-6A synthase2e-53209
NC_014633:442755:4680084680084691741167Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencecobalamin biosynthesis protein CbiD1e-50200
NC_013407:1527454:1527454152745415285451092Methanocaldococcus vulcanius M7, complete genomecobalamin biosynthesis protein CbiD3e-50199
NC_011094:2061000:2089213208921320903521140Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-6A synthase1e-49197
NC_012962:1827000:1833641183364118347771137Photorhabdus asymbiotica, complete genomedeacytlating cobalt-precorrin-6A synthase3e-49196
NC_011149:2040396:2067525206752520686641140Salmonella enterica subsp. enterica serovar Agona str. SL483,cobalamin biosynthesis protein CbiD2e-49196
NC_009135:330628:3487523487523498491098Methanococcus maripaludis C5, complete genomecobalamin biosynthesis protein CbiD3e-48192
NC_019903:1058657:1062507106250710636521146Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,cobalt-precorrin 5B C1-methyltransferase3e-48192
NC_005126:3485330:3496399349639934975351137Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobalt-precorrin-6A synthase1e-47190
NC_015847:1261276:1276429127642912775261098Methanococcus maripaludis XI chromosome, complete genomecobalt-precorrin-6A synthase2e-47190
NC_005791:1173000:1189053118905311901501098Methanococcus maripaludis S2, complete genomecobalt-precorrin-6A synthase6e-46184
NC_009637:438037:4582984582984593981101Methanococcus maripaludis C7 chromosome, complete genomecobalt-precorrin-6A synthase2e-44180
NC_015216:1941000:1961679196167919627551077Methanobacterium sp. AL-21 chromosome, complete genomecobalt-precorrin-6A synthase3e-43176
NC_018866:1224748:1233601123360112347281128Dehalobacter sp. DCA chromosome, complete genomeCobalt-precorrin-6 synthase, anaerobic3e-41169
NC_018867:1303287:1312140131214013132671128Dehalobacter sp. CF chromosome, complete genomeCobalt-precorrin-6 synthase, anaerobic3e-41169
NC_009634:547995:5693595693595704681110Methanococcus vannielii SB chromosome, complete genomecobalt-precorrin-6A synthase6e-41168
NC_012491:1263469:1275032127503212761681137Brevibacillus brevis NBRC 100599, complete genomeputative cobalt-precorrin-6A synthase [deacetylating]3e-38159
NC_010382:3350816:3363787336378733649201134Lysinibacillus sphaericus C3-41, complete genomeputative cobalt-precorrin-6A synthase (deacetylating)1e-36154
NC_020829:636773:6601626601626612591098Pseudomonas denitrificans ATCC 13867, complete genomecobalt-precorrin-6A synthase5e-36152
NC_008148:672608:6754326754326765981167Rubrobacter xylanophilus DSM 9941, complete genomecobalamin biosynthesis protein CbiD1e-35150
NC_003106:1809137:1834447183444718355111065Sulfolobus tokodaii str. 7, complete genomecobalt-precorrin-6A synthase2e-35150
NC_011026:2624775:2645811264581126471061296Chloroherpeton thalassium ATCC 35110, complete genomecobalamin biosynthesis protein CbiD3e-35149
NC_017276:85380:9699096990980391050Sulfolobus islandicus REY15A chromosome, complete genomecobalamin biosynthesis protein CbiD2e-35149
NC_012632:87590:9714197141981901050Sulfolobus islandicus M.16.27 chromosome, complete genomecobalt-precorrin-6A synthase5e-35148
NC_012588:87592:9714397143981921050Sulfolobus islandicus M.14.25 chromosome, complete genomecobalt-precorrin-6A synthase5e-35148
NC_012589:87592:9714397143981921050Sulfolobus islandicus L.S.2.15, complete genomecobalamin biosynthesis protein CbiD6e-35148
NC_013769:87582:9714797147981961050Sulfolobus islandicus L.D.8.5 chromosome, complete genomecobalamin biosynthesis protein CbiD1e-34147
NC_010511:2703684:2718386271838627194801095Methylobacterium sp. 4-46 chromosome, complete genomecobalt-precorrin-6A synthase2e-33143
NC_014622:5315500:5327007532700753281521146Paenibacillus polymyxa SC2 chromosome, complete genomecobalt-precorrin-6a synthase5e-33142
NC_015690:7518732:7520097752009775212391143Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCbiD3e-33142
NC_014483:4957315:4968719496871949698701152Paenibacillus polymyxa E681 chromosome, complete genomePutative cobalt-precorrin-6A synthase (deacetylating)3e-32139
NC_006138:225832:2359762359762370641089Desulfotalea psychrophila LSv54, complete genomecobalamin biosynthesis protein (CbiD)5e-32138
NC_016641:1085862:1095905109590510970501146Paenibacillus terrae HPL-003 chromosome, complete genomecobalt-precorrin-6A synthase7e-32138
NC_007181:333891:3400973400973411641068Sulfolobus acidocaldarius DSM 639, complete genomecobalt-precorrin-6A synthase2e-30133
NC_021177:4258102:4269912426991242710631152Streptomyces fulvissimus DSM 40593, complete genomePutative cobalt-precorrin-6A synthase [deacetylating]7e-30131
NC_021171:415771:4233824233824245001119Bacillus sp. 1NLA3E, complete genomecobalt-precorrin-6A synthase2e-29129
NC_011059:1391734:1403820140382014049291110Prosthecochloris aestuarii DSM 271, complete genomecobalamin (vitamin B12) biosynthesis CbiD protein2e-28127
NC_016776:2956444:2958246295824629601741929Bacteroides fragilis 638R, complete genomeputative bifunctional CbiD/CbiJ cobalamin biosynthesis protein5e-25115
NC_006347:2899653:2899653289965329015811929Bacteroides fragilis YCH46, complete genomeprecorrin-6X reductase CbiD5e-25115
NC_003228:2973266:2973266297326629751941929Bacteroides fragilis NCTC 9343, complete genomeputative bifunctional CbiD/CbiJ cobalamin biosynthesis protein5e-25115
NC_011758:369704:3718873718873729721086Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completecobalamin biosynthesis protein CbiD8e-25114
NC_014166:2149984:2160342216034221613641023Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecobalamin (vitamin B12) biosynthesis protein CbiD4e-2099
NC_020389:1730376:1744490174449017455091020Methanosarcina mazei Tuc01, complete genomeCobalt-precorrin-6 synthase, anaerobic1e-1687.8
NC_007955:1779222:1785286178528617863081023Methanococcoides burtonii DSM 6242, complete genomecobalamin biosynthesis protein1e-1480.9