Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2254279 Clostridium novyi NT, complete genome

Start: 2254279, End: 2255070, Length: 792

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004557:749330:767134767134767937804Clostridium tetani E88, complete genomeanaerobic cobalt chelatase cbiK5e-79294
NC_014328:3482980:348603434860343486855822Clostridium ljungdahlii ATCC 49587 chromosome, complete genomesirohydrochlorin cobaltochelatase8e-65247
NC_010001:1702350:172742117274211728206786Clostridium phytofermentans ISDg, complete genomeanaerobic cobalt chelatase1e-64246
NC_021182:1245692:124668412466841247529846Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CbiK, Co2+ chelatase2e-64246
NC_013316:3863728:3878930387893038804081479Clostridium difficile R20291, complete genomesirohydrochlorin cobaltochelatase2e-64245
NC_009089:3998347:4013526401352640150041479Clostridium difficile 630, complete genomesirohydrochlorin cobaltochelatase2e-64245
NC_003030:1510000:151688615168861517722837Clostridium acetobutylicum ATCC 824, complete genomeAnaerobic Cobalt chelatase, cbiK5e-59227
NC_015687:1508664:151848715184871519323837Clostridium acetobutylicum DSM 1731 chromosome, complete genomeanaerobic cobalt chelatase CbiK5e-59227
NC_017295:1507956:151630015163001517136837Clostridium acetobutylicum EA 2018 chromosome, complete genomeAnaerobic Cobalt chelatase, cbiK5e-59227
NC_012962:1827000:183925818392581840052795Photorhabdus asymbiotica, complete genomesirohydrochlorin cobaltochelatase3e-56218
NC_015275:3976631:398895239889523989749798Clostridium lentocellum DSM 5427 chromosome, complete genomeSirohydrochlorin cobaltochelatase1e-54213
NC_014376:869749:885384885384886181798Clostridium saccharolyticum WM1 chromosome, complete genomeSirohydrochlorin cobaltochelatase2e-54212
NC_013892:853366:859521859521860315795Xenorhabdus bovienii SS-2004 chromosome, complete genomeSirohydrochlorin cobaltochelatase6e-54210
NC_003366:1427785:143016814301681431010843Clostridium perfringens str. 13, complete genomeCbiK protein1e-51203
NC_011149:2040396:206225520622552063049795Salmonella enterica subsp. enterica serovar Agona str. SL483,sirohydrochlorin cobaltochelatase4e-50198
NC_014614:284005:311454311454312230777Clostridium sticklandii, complete genomeSirohydrochlorin cobaltochelatase6e-50197
NC_011094:2061000:208394320839432084737795Salmonella enterica subsp. enterica serovar Schwarzengrund strsirohydrochlorin cobaltochelatase6e-50197
NC_010337:524605:540809540809541630822Heliobacterium modesticaldum Ice1, complete genomecobalt chelatase cbik6e-44177
NC_015737:879545:8900818900818917331653Clostridium sp. SY8519, complete genomehypothetical protein1e-43176
NC_006138:225832:2287912287912298011011Desulfotalea psychrophila LSv54, complete genomecobalt chelatase, chain A1e-34146
NC_014972:3688000:369503036950303695935906Desulfobulbus propionicus DSM 2032 chromosome, complete genomeanaerobic cobaltochelatase1e-34146
NC_013192:107672:108934108934109701768Leptotrichia buccalis DSM 1135, complete genomeanaerobic cobalt chelatase8e-33140
NC_013165:2700978:2712696271269627139401245Slackia heliotrinireducens DSM 20476, complete genomecobalamin biosynthesis protein CbiK, Co2+ chelatase2e-30132
NC_011059:1391734:141094214109421411895954Prosthecochloris aestuarii DSM 271, complete genomeanaerobic cobalt chelatase3e-23108
NC_012796:77071:781177811778998882Desulfovibrio magneticus RS-1, complete genomeputative sirohydrochlorin cobaltochelatase1e-1790.5
NC_011768:3854455:386032538603253861095771Desulfatibacillum alkenivorans AK-01, complete genomeanaerobic cobalt chelatase1e-1790.5
NC_010001:2176394:219285721928572193663807Clostridium phytofermentans ISDg, complete genomeanaerobic cobalt chelatase6e-1684.7
NC_011883:1314624:132944613294461330228783Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,anaerobic cobalt chelatase5e-1581.6
NC_014166:2149984:216319521631952164013819Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeanaerobic cobalt chelatase4e-0858.9