Pre_GI: BLASTP Hits

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Query: NC_008593:196257:210096 Clostridium novyi NT, complete genome

Start: 210096, End: 210497, Length: 402

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:198315:214765214765215166402Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein4e-45179
NC_010674:222016:223125223125223523399Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein4e-35146
NC_008262:2598920:264615926461592646560402Clostridium perfringens SM101, complete genomehypothetical protein4e-35146
NC_010723:223935:225043225043225441399Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein5e-35145
NC_014393:4482896:452749445274944527898405Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein6e-33139
NC_019970:336472:352859352859353254396Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehypothetical protein1e-27121
NC_009012:2100000:210482221048222105217396Clostridium thermocellum ATCC 27405, complete genomehypothetical protein9e-27118
NC_007503:2098980:210074221007422101137396Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein3e-21100
NC_019903:421000:432536432536432928393Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein4e-2096.7
NC_015275:3243689:325824032582403258638399Clostridium lentocellum DSM 5427 chromosome, complete genomehypothetical protein7e-1889