Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3243689 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324368932450681380MATE efflux family proteinQuickGO ontologyBLASTP
324514232468991758hypothetical protein
324717932482791101hypothetical proteinBLASTP
32484333248594162protein of unknown function DUF1407QuickGO ontology
324867632506461971Fructose-bisphosphataseQuickGO ontologyBLASTP
325067432511534802C-methyl-D-erythritol 24-cyclodiphosphate synthaseQuickGO ontologyBLASTP
32511473251992846HAD-superfamily hydrolase subfamily IIBQuickGO ontologyBLASTP
32520673252252186hypothetical protein
3252582325265574tRNA-MetQuickGO ontologyBLASTP
3252663325273573tRNA-ValQuickGO ontologyBLASTP
3252740325281374tRNA-AspQuickGO ontologyBLASTP
3252824325289673tRNA-TrpQuickGO ontology
32531383253587450hypothetical protein
3253672325374877tRNA-MetQuickGO ontologyBLASTP
3253756325382873tRNA-ValQuickGO ontologyBLASTP
3253838325391073tRNA-TrpQuickGO ontology
32573033257995693protein of unknown function DUF45QuickGO ontologyBLASTP
32582403258638399hypothetical proteinBLASTP
32587443259223480NUDIX hydrolaseQuickGO ontology
325938732609431557AbgT transporterQuickGO ontologyBLASTP
32613383261529192protein of unknown function DUF1271QuickGO ontologyBLASTP
32616143262069456transcription activator effector binding proteinQuickGO ontologyBLASTP
326214232635391398DNA repair protein RadAQuickGO ontologyBLASTP
32644313264844414hypothetical proteinBLASTP
326521432676822469ATPase AAA-2 domain proteinQuickGO ontologyBLASTP