Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1122531 Clostridium novyi NT, complete genome

Start: 1122531, End: 1122800, Length: 270

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:2860960:286282328628232863092270Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthesis protein FliQ2e-1891.3
NC_014328:1135854:114378211437821144051270Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis protein FliQ2e-1891.3
NC_009698:2649453:265131626513162651585270Clostridium botulinum A str. Hall chromosome, complete genomeflagellar biosynthesis protein FliQ2e-1890.9
NC_021182:2883716:289824828982482898517270Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliQ4e-1890.1
NC_009617:4911595:491564949156494915918270Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeexport protein FliQ1e-1065.5
NC_020291:4903981:492656349265634926832270Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FliQ5e-1063.2
NC_010674:858397:872278872278872547270Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein FliQ7e-1062.4
NC_010723:833870:850585850585850854270Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein FliQ1e-0962
NC_021184:2238500:225807322580732258342270Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliQ1e-0755.1
NC_015391:2059191:207716920771692077432264Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliQ4e-0753.5
NC_009253:2615777:261761926176192617888270Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthetic protein FliQ3e-0650.8
NC_019908:852230:867951867951868220270Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar protein FliO/FliZ3e-0650.4
NC_014330:2409559:241196124119612412230270Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative flagellar protein FliO/FliZ3e-0650.4
NC_018604:1329228:133003513300351330304270Brachyspira pilosicoli WesB complete genomeputative flagellar protein FliO/FliZ3e-0650.4
NC_018607:1134900:113570811357081135977270Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliQ4e-0650.1