Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1112242 Clostridium novyi NT, complete genome

Start: 1112242, End: 1113039, Length: 798

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009698:2649453:266101326610132661789777Clostridium botulinum A str. Hall chromosome, complete genomeflagellar assembly protein FliH2e-30133
NC_009697:2714668:272408627240862724862777Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar assembly protein FliH2e-30133
NC_010520:2860960:287252328725232873311789Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar assembly protein FliH3e-30132
NC_017297:2854934:285907628590762859483408Clostridium botulinum F str. 230613 chromosome, complete genome2e-2099.4
NC_010674:858397:860966860966861739774Clostridium botulinum B str. Eklund 17B, complete genomeflagellar assembly protein6e-1994.7
NC_010723:833870:839257839257840042786Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar assembly protein4e-1789
NC_020291:4903981:493539949353994936184786Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthesis/type III secretory pathway protein5e-1685.1
NC_009617:4911595:492419149241914924967777Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar biosynthesis/type III secretory pathway protein-like protein7e-1581.3
NC_010718:1454087:146528714652871466054768Natranaerobius thermophilus JW/NM-WN-LF, complete genomeH+transporting two-sector ATPase E subunit1e-0653.5
NC_018664:1663324:168229816822981683095798Clostridium acidurici 9a chromosome, complete genomeflagellar assembly protein FliH2e-0653.1