Pre_GI: BLASTP Hits

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Query: NC_008542:1021848:1030031 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 1030031, End: 1030429, Length: 399

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008060:476861:485382485382485657276Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein4e-47186
NC_012856:2815797:284609528460952846448354Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, XRE family5e-1683.2
NC_012968:239476:241214241214241558345Methylotenera mobilis JLW8, complete genometranscriptional regulator, XRE family3e-1580.5
NC_015422:3581848:358870835887083589061354Alicycliphilus denitrificans K601 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1579.7
NC_016002:2946702:296578929657892966139351Pseudogulbenkiania sp. NH8B, complete genomehelix-turn-helix domain containing protein2e-1477.8
NC_005085:1269787:127673512767351277082348Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-1477.4
NC_014394:1594071:160903816090381609412375Gallionella capsiferriformans ES-2 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1476.6
NC_007651:3064530:314061031406103140957348Burkholderia thailandensis E264 chromosome I, complete sequenceHelix-turn-helix domain protein, putative8e-1475.9
NC_012691:2476223:250564725056472505994348Tolumonas auensis DSM 9187, complete genometranscriptional regulator, XRE family2e-1374.7
NC_016002:1:141721417214573402Pseudogulbenkiania sp. NH8B, complete genomeXRE family transcriptional regulator3e-1373.9
NC_011000:1262324:130345613034561303824369Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein3e-1373.9
NC_007951:2233676:225294022529402253398459Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted transcriptional regulator, XRE family5e-1269.7
NC_015424:3520783:352380635238063524156351Aeromonas veronii B565 chromosome, complete genomeHelix-turn-helix domain-containing protein6e-1269.3
NC_008570:1143578:118341811834181183768351Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehelix-turn-helix domain protein2e-1167.8
NC_012724:2611000:261794626179462618323378Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein5e-1166.6
NC_016830:3869572:393157739315773931834258Pseudomonas fluorescens F113 chromosome, complete genomeXRE family transcriptional regulator2e-1064.7
NC_014910:3727887:374055337405533740909357Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein1e-0962
NC_006350:595893:615702615702616079378Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein6e-0959.7
NC_009512:3282500:330922433092243309568345Pseudomonas putida F1, complete genometranscriptional regulator, XRE family8e-0959.3
NC_005126:1265071:130947513094751309813339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5
NC_005126:4333767:435394543539454354283339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5
NC_005126:1613818:162726016272601627598339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5
NC_005126:4333767:434657743465774346915339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5
NC_014228:2883500:289875728987572899128372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR9e-0855.5
NC_014228:2883500:289160828916082891979372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR9e-0855.5
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein1e-0755.1
NC_014727:95875:103009103009103629621Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,peptidase s24-like protein2e-0754.7
NC_010001:109893:129389129389129880492Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family4e-0753.5
NC_013895:117429:164188164188164820633Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDNA-binding protein4e-0753.5
NC_015633:2565753:258423625842362584445210Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein5e-0753.1
NC_014644:1275038:127837012783701279002633Gardnerella vaginalis ATCC 14019 chromosome, complete genomeXRE family transcriptional regulator7e-0752.8
NC_013721:533048:555423555423556055633Gardnerella vaginalis 409-05, complete genomeDNA-binding protein7e-0752.8
NC_009328:293000:362637362637363419783Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein8e-0752.4
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator2e-0651.6
NC_015064:1268223:128553412855341286067534Acidobacterium sp. MP5ACTX9 chromosome, complete genomehelix-turn-helix domain protein2e-0651.2
NC_012962:1068102:109723810972381097639402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0650.4
NC_012962:1068102:108946510894651089866402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0650.4
NC_021175:2063611:207187220718722072216345Streptococcus oligofermentans AS 1.3089, complete genomeCro/CI family transcriptional regulator5e-0650.1
NC_012791:2590500:260313226031322603551420Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family4e-0650.1
NC_011768:3385719:341239234123923412739348Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family4e-0650.1
NC_011768:1718869:177180317718031772150348Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family6e-0649.7
NC_015711:4067905:409415940941594094533375Myxococcus fulvus HW-1 chromosome, complete genomeDNA-binding protein7e-0649.3
NC_021184:3497000:350753735075373508112576Desulfotomaculum gibsoniae DSM 7213, complete genomeputative transcription factor, MBF1 like protein8e-0648.9
NC_010001:69000:909309093091751822Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family9e-0648.9