Pre_GI: BLASTP Hits

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Query: NC_008463:5364428:5376956 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5376956, End: 5377381, Length: 426

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:5192264:520590052059005206325426Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein PilE3e-57219
NC_009439:1075170:108109010810901081515426Pseudomonas mendocina ymp, complete genomeTfp pilus assembly protein PilE-like protein4e-31133
NC_015740:926920:931932931932932357426Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTfp pilus assembly protein PilE-like protein1e-29128
NC_015410:1144272:114917611491761149637462Pseudomonas mendocina NK-01 chromosome, complete genomeTfp pilus assembly protein PilE-like protein1e-1685.5
NC_009434:1068281:107330110733011073708408Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilE6e-1579.7
NC_015556:4118304:413193541319354132417483Pseudomonas fulva 12-X chromosome, complete genometype IV pilin1e-1065.1
NC_009092:1263964:127753112775311277923393Shewanella loihica PV-4, complete genomemethylation site containing protein3e-0857.4
NC_014931:6415940:642444364244436424994552Variovorax paradoxus EPS chromosome, complete genomefimbrial protein pilin1e-0755.5
NC_008700:1115436:112694511269451127343399Shewanella amazonensis SB2B, complete genometype IV pilus biogenesis protein PilE2e-0651.6
NC_008782:3361850:337399733739973374485489Acidovorax sp. JS42, complete genomefimbrial protein pilin3e-0650.4