Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1328895 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1328895, End: 1330193, Length: 1299

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018145:50237:6841168411695321122Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completemajor facilitator superfamily protein3e-22106
NC_013174:309943:3109233109233121491227Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_15e-22105
NC_014532:2146466:2149485214948521506211137Halomonas elongata DSM 2581, complete genomemajor facilitator superfamily transporter9e-22105
NC_016109:8256000:8257909825790982591051197Kitasatospora setae KM-6054, complete genomeputative major facilitator superfamily transporter2e-20100
NC_013174:601434:6138556138556151321278Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_13e-20100
NC_007777:461500:4802454802454815761332Frankia sp. CcI3, complete genomemajor facilitator superfamily MFS_16e-1995.9
NC_015224:647341:6578566578566590311176Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative membrane transport protein8e-1685.5
NC_020908:4263552:4275886427588642770641179Octadecabacter arcticus 238, complete genomeputative MFS-type transporter6e-1582.4
NC_016845:1773416:1776419177641917776211203Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative DEOR-type transcriptional regulator1e-1481.3
NC_008800:2695977:2707420270742027085921173Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative inner membrane protein4e-1479.7
NC_020911:18500:2219922199233261128Octadecabacter antarcticus 307, complete genomeputative MFS-type transporter9e-1478.6
NC_015496:2155816:2170055217005521712121158Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemajor facilitator superfamily MFS_11e-1274.7
NC_015224:2701914:2714096271409627151811086Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative inner membrane protein2e-1274.3
NC_012947:2898179:2911127291112729123351209Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemajor facilitator superfamily MFS_12e-1274.3
NC_011601:846358:8505138505138517211209Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter2e-1273.9
NC_017093:6461486:6482792648279264840361245Actinoplanes missouriensis 431, complete genomeputative MFS transporter3e-1273.6
NC_009436:1466580:1470176147017614713901215Enterobacter sp. 638, complete genomemajor facilitator transporter3e-1273.2
NC_008800:614850:6253756253756265501176Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative membrane transport protein1e-1171.6
NC_011886:4336417:4366851436685143680441194Arthrobacter chlorophenolicus A6, complete genomemajor facilitator superfamily MFS_12e-1170.9
NC_011094:973140:9937239937239949341212Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1170.5
NC_016612:3361802:3366927336692733681291203Klebsiella oxytoca KCTC 1686 chromosome, complete genomemajor facilitator superfamily protein2e-1170.5
NC_011083:967260:9878609878609890711212Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YbjJ2e-1170.5
NC_016810:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-1169.3
NC_016857:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein/regulator5e-1169.3
NC_017046:919249:9398369398369410471212Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-1169.3
NC_003197:920000:9405939405939418041212Salmonella typhimurium LT2, complete genomeputative transport protein/regulator5e-1169.3
NC_016856:921057:9416459416459428561212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transport protein/regulator5e-1169.3
NC_016860:959609:9801979801979814081212Salmonella enterica subsp. enterica serovar Typhimurium strputative transport protein/regulator5e-1169.3
NC_016863:920346:9409349409349421451212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein/regulator5e-1169.3
NC_009664:1569335:1612590161259016138191230Kineococcus radiotolerans SRS30216, complete genomemajor facilitator superfamily MFS_19e-1168.6
NC_013174:601434:6125276125276138581332Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_19e-1168.6
NC_018750:3481476:3488879348887934900811203Streptomyces venezuelae ATCC 10712, complete genomeputative transmembrane transport protein2e-1067.8
NC_011294:878896:8994858994859006961212Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1067.8
NC_011205:944125:9647299647299659401212Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1067
NC_015656:105840:1141371141371158281692Frankia symbiont of Datisca glomerata chromosome, complete genomemajor facilitator superfamily protein3e-1067
NC_011080:924326:9449279449279461381212Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YbjJ3e-1067
NC_006905:946418:9683409683409695511212Salmonella enterica subsp. enterica serovar Choleraesuis strputative transport protein/putative regulatorn3e-1067
NC_012125:894955:9155419155419167521212Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1067
NC_014550:2091797:2126004212600421272211218Arthrobacter arilaitensis Re117, complete genomeputative MFS superfamily transporter5e-1066.2
NC_011274:896802:9173929173929186031212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-0965.1
NC_008752:725189:762900762900763748849Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane protein2e-0964.3
NC_003888:7659639:7663852766385276650031152Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0653.9
NC_013093:1213908:1239473123947312406631191Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_15e-0652.8