Pre_GI: BLASTP Hits

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Query: NC_008278:1845000:1863709 Frankia alni ACN14a, complete genome

Start: 1863709, End: 1864353, Length: 645

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014391:16188:1618816188173391152Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein1e-37156
NC_014666:13876:3056730567317601194Frankia sp. EuI1c chromosome, complete genomeintegrase family protein4e-37154
NC_009921:6691089:6703155670315567044351281Frankia sp. EAN1pec, complete genomeintegrase family protein3e-1995.1
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase6e-1890.9
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein4e-1788.2
NC_012526:300126:3162543162543173931140Deinococcus deserti VCD115, complete genomeputative Tyrosine recombinase xerC-like protein1e-1686.3
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein3e-1582
NC_006087:885760:894890894890895621732Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase2e-1479
NC_008148:2231045:2231045223104522321811137Rubrobacter xylanophilus DSM 9941, complete genomephage integrase3e-1478.6
NC_019897:3057000:3064727306472730658631137Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD8e-1477
NC_007777:135222:1403051403051416001296Frankia sp. CcI3, complete genomephage integrase1e-1376.3
NC_009142:267550:2744052744052757241320Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase (recombinase)5e-1374.3
NC_016114:4210173:4236833423683342379811149Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase1e-1272.8
NC_010397:1751067:1754551175455117558011251Mycobacterium abscessus chromosome Chromosome, complete sequencePutative phage integrase2e-1272.4
NC_016048:2873669:2906496290649629076981203Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase2e-1272.4
NC_013235:508585:5258015258015269161116Nakamurella multipartita DSM 44233, complete genomeintegrase family protein4e-1271.6
NC_010572:4181403:4204639420463942059101272Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase3e-1271.6
NC_009142:515828:5195005195005208461347Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase (recombinase)7e-1270.5
NC_021177:3997727:4017071401707140182281158Streptomyces fulvissimus DSM 40593, complete genomePhage integrase9e-1270.5
NC_016048:2873669:2905525290552529065321008Oscillibacter valericigenes Sjm18-20, complete genomeputative recombinase1e-1170.1
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein4e-1168.2
NC_002936:1319266:1333144133314413343041161Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family7e-1167.4
NC_015635:5222000:5244912524491252461351224Microlunatus phosphovorus NM-1, complete genomeputative integrase7e-1167.4
NC_006087:28490:4660446604479081305Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase6e-1167.4
NC_006087:345976:3584293584293597331305Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase6e-1167.4
NC_003888:3602753:3602753360275336039071155Streptomyces coelicolor A3(2), complete genomeintegrase1e-1066.2
NC_013921:1396500:1398270139827013994661197Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein4e-1065.1
NC_002936:797110:8092918092918105981308Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family1e-0963.5
NC_016048:3261166:3281077328107732822851209Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-0963.2
NC_013174:2321000:2324963232496323261501188Jonesia denitrificans DSM 20603, complete genomeintegrase family protein3e-0962
NC_016943:1037000:1037784103778410391991416Blastococcus saxobsidens DD2, complete genomeintegrase3e-0962
NC_021177:4221309:4248131424813142494081278Streptomyces fulvissimus DSM 40593, complete genomeIntegrase3e-0961.6
NC_014721:2201790:2230397223039722315211125Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein4e-0961.6
NC_015656:5084767:5088729508872950899701242Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein7e-0960.8
NC_009455:820821:8332778332778343831107Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein1e-0860.1
NC_015656:381554:3852123852123865521341Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein1e-0859.7
NC_020410:1123121:112994211299421130733792Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeDNA integration/recombination/invertion protein2e-0859.7
NC_020387:796253:8023368023368034931158Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, phage integrase family2e-0859.3
NC_009921:6483660:6508769650876965099771209Frankia sp. EAN1pec, complete genomeintegrase family protein2e-0858.9
NC_015656:454500:466640466640467551912Frankia symbiont of Datisca glomerata chromosome, complete genome4e-0858.2
NC_015387:1278471:129202412920241292524501Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeintegrase family protein5e-0857.8
NC_017186:9604427:9628953962895396301581206Amycolatopsis mediterranei S699 chromosome, complete genomephage integrase1e-0756.6
NC_014318:9604367:9628893962889396300981206Amycolatopsis mediterranei U32 chromosome, complete genomeputative phage integrase1e-0756.6
NC_015635:4097711:4113207411320741144211215Microlunatus phosphovorus NM-1, complete genomeputative recombinase1e-0756.6
NC_008699:1673181:1714744171474417158501107Nocardioides sp. JS614, complete genomephage integrase family protein2e-0755.8
NC_017955:2494640:2529517252951725307191203Modestobacter marinus, complete genomeintegrase3e-0755.5
NC_020134:420500:4225864225864238031218Clostridium stercorarium subsp. stercorarium DSM 8532, completetyrosine recombinase XerC-like protein3e-0755.5
NC_010572:3925803:3928435392843539296221188Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase4e-0754.7
NC_013929:6251989:6271489627148962727271239Streptomyces scabiei 87.22 chromosome, complete genomeintegrase7e-0753.9
NC_014650:603500:6101966101966113951200Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-0753.9
NC_015697:1480552:1484807148480714860391233Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase7e-0753.9
NC_009012:2927793:2931283293128329323951113Clostridium thermocellum ATCC 27405, complete genomephage integrase9e-0753.5
NC_013729:380312:3997093997094010041296Kribbella flavida DSM 17836, complete genomeintegrase family protein1e-0653.5
NC_021182:554000:5551545551545563141161Clostridium pasteurianum BC1, complete genomesite-specific recombinase XerD2e-0652.8
NC_009328:814530:8199338199338210961164Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA integration/recombination/invertion protein3e-0652
NC_013131:9903320:9942019994201999435421524Catenulispora acidiphila DSM 44928, complete genomeDNA binding domain protein, excisionase family3e-0652
NC_009253:529494:5351385351385362891152Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein4e-0651.6
NC_017955:693303:7105207105207117371218Modestobacter marinus, complete genomeintegrase4e-0651.6
NC_014210:4122514:4126849412684941283271479Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein8e-0650.4
NC_015953:1860946:1866376186637618676831308Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein9e-0650.4