Pre_GI: BLASTP Hits

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Query: NC_008269:577111:590613 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 590613, End: 592460, Length: 1848

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:98567:1200181200181218921875Rhodococcus opacus B4, complete genomeputative ribonuclease3e-127456
NC_020389:571466:5714665714665732651800Methanosarcina mazei Tuc01, complete genomeExoribonuclease II7e-42172
NC_011884:2551715:2551715255171525535621848Cyanothece sp. PCC 7425, complete genomeribonuclease II4e-34146
NC_008781:2575213:2575213257521325773722160Polaromonas naphthalenivorans CJ2, complete genomeribonuclease R2e-1791.7
NC_004557:363628:3762663762663783922127Clostridium tetani E88, complete genomeexoribonuclease II1e-1689
NC_014479:3245126:3245126324512632474652340Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeribonuclease R1e-1688.6
NC_011978:1812000:1818095181809518202272133Thermotoga neapolitana DSM 4359, complete genomeRibonuclease R6e-1686.3
NC_013642:505518:5186435186435207752133Thermotoga naphthophila RKU-10, complete genomeribonuclease R3e-1584.3
NC_012673:785718:8037798037798061842406Exiguobacterium sp. AT1b, complete genomeribonuclease R1e-1482.4
NC_011567:2468708:2468708246870824709842277Anoxybacillus flavithermus WK1, complete genomeExoribonuclease R2e-1481.3
NC_010278:1625695:1653374165337416557312358Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,ribonuclease R3e-1377.4
NC_009053:1668500:1692326169232616946832358Actinobacillus pleuropneumoniae L20, complete genomeribonuclease R3e-1377
NC_010674:3141228:3151182315118231534222241Clostridium botulinum B str. Eklund 17B, complete genomeribonuclease R4e-1377
NC_010939:1633000:1656085165608516584422358Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeribonuclease R1e-1275.5
NC_007350:1971762:1973249197324919756392391Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,exoribonuclease2e-1274.3
NC_015161:792955:8127928127928170964305Deinococcus proteolyticus MRP chromosome, complete genomeribonuclease R3e-1273.9
NC_017353:2129738:2131550213155021339252376Staphylococcus lugdunensis N920143, complete genomeputative ribonuclease R4e-1273.6
NC_014829:3741843:3757484375748437598622379Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribonuclease R7e-1272.8
NC_015602:117939:1389961389961413382343Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeexoribonuclease R4e-1067
NC_020304:2107979:2149365214936521515752211Desulfocapsa sulfexigens DSM 10523, complete genomeRNAse R4e-1067
NC_010280:769639:7725127725127745962085Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeexoribonuclease II9e-1065.9
NC_010287:769600:7724737724737745572085Chlamydia trachomatis 434/Bu, complete genomeexoribonuclease II9e-1065.9
NC_015744:769907:7721827721827742662085Chlamydia trachomatis L2c chromosome, complete genomeribonuclease R9e-1065.9
NC_017168:687471:7083337083337108672535Yersinia pestis A1122 chromosome, complete genomeexoribonuclease R1e-0965.5
NC_008150:4373722:4394584439458443971182535Yersinia pestis Antiqua, complete genomeribonuclease R1e-0965.5
NC_017431:451551:4544244544244565082085Chlamydia trachomatis E/11023 chromosome, complete genomeexoribonuclease II2e-0964.7
NC_017439:451535:4544084544084564922085Chlamydia trachomatis E/150 chromosome, complete genomeexoribonuclease II2e-0964.7
NC_013740:1081454:1101239110123911037102472Acidaminococcus fermentans DSM 20731, complete genomeribonuclease R4e-0963.9
NC_002179:237854:2530682530682550982031Chlamydophila pneumoniae AR39, complete genomeexoribonuclease, VacB/Rnb family1e-0862.4
NC_002491:585807:5858075858075878372031Chlamydophila pneumoniae J138, complete genomeribonuclease family1e-0862.4
NC_015966:2875140:2888019288801928899981980Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeExoribonuclease II1e-0862
NC_004552:235769:2535432535432555912049Chlamydophila abortus S26/3, complete genomeputative ribonuclease2e-0861.6
NC_014624:2668157:2695671269567126978242154Eubacterium limosum KIST612 chromosome, complete genomeribonuclease R1e-0655.5