Pre_GI: BLASTP Hits

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Query: NC_008268:442657:443606 Rhodococcus sp. RHA1, complete genome

Start: 443606, End: 444277, Length: 672

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008268:442657:456425456425457084660Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein4e-61234
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator7e-1890.9
NC_017904:1831071:183107118310711831727657Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein TetR8e-1787
NC_009664:1434974:145727214572721457886615Kineococcus radiotolerans SRS30216, complete genomeTetracyclin repressor domain protein1e-1169.7
NC_010410:3606826:364313736431373643814678Acinetobacter baumannii AYE, complete genometetracycline repressor protein2e-1066.2
NC_011586:268927:291388291388292065678Acinetobacter baumannii AB0057 chromosome, complete genometetracycline repressor protein, class A2e-1066.2
NC_012668:3037345:304768430476843048361678Vibrio cholerae MJ-1236 chromosome 1, complete sequencetetracycline repressor2e-1066.2
NC_010410:3606826:367271136727113673337627Acinetobacter baumannii AYE, complete genomeTetracycline repressor protein class G2e-1065.9
NC_016860:4055117:406437340643734064996624Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline repressor protein TetR4e-1065.1
NC_011749:34056:448344483445460627Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceTetR family transcriptional regulator4e-1065.1
CU928145:4950723:497335049733504973976627Escherichia coli 55989 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.1
NC_011748:4950723:497335049733504973976627Escherichia coli 55989, complete genometetracycline repressor protein TetR4e-1065.1
NC_010939:405477:417091417091417717627Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline repressor protein class B from transposon Tn104e-1065.1
NC_003384:157158:179219179219179845627Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline repressor protein4e-1065.1
NC_013365:92973:959939599396619627Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTetR family transcriptional regulator4e-1065.1
NC_017171:280762:286950286950287576627Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometetracycline repressor protein TetR4e-1065.1
NC_017328:1075535:110734211073421107968627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.1
NC_017328:1075535:111874711187471119373627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.1
NC_017387:247462:288973288973289599627Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline repressor protein class G4e-1065.1
NC_009349:3396:339633964028633Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline repressor protein TetR(E)4e-1064.7
NC_009838:81913:908869088691545660Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencehypothetical protein6e-1064.3
NC_020418:448687:458161458161458784624Morganella morganii subsp. morganii KT, complete genomehypothetical protein9e-1063.5
NC_019673:8161242:816215981621598162875717Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family3e-0962
NC_014815:6576983:658020065802006580892693Micromonospora sp. L5 chromosome, complete genomeregulatory protein tetr4e-0961.6
NC_013929:5850599:586537458653745866114741Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_010519:1963256:197888119788811979504624Haemophilus somnus 2336 chromosome, complete genomeTetR family transcriptional regulator7e-0960.8
NC_014976:684000:689323689323690003681Bacillus subtilis BSn5 chromosome, complete genomeTranscriptional regulator8e-0960.5
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator3e-0858.5
NC_003888:8613848:861831386183138618951639Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator1e-0756.6
NC_015656:2565417:258060425806042581263660Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR1e-0756.6
NC_002944:99000:104739104739105512774Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0755.1
NC_010676:2658495:268410526841052684884780Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, TetR family1e-0653.5
NC_008596:3404832:340867134086713409429759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, TetR family protein1e-0653.5
NC_009664:1434974:145201714520171452733717Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family1e-0653.1
NC_014246:1545214:154879115487911549492702Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_014391:1317957:132412413241241324828705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR3e-0652
NC_013929:3953046:395783739578373958523687Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6