Pre_GI: BLASTP Hits

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Query: NC_008268:3418000:3418082 Rhodococcus sp. RHA1, complete genome

Start: 3418082, End: 3418726, Length: 645

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008596:3404832:342173434217343422429696Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein3e-1995.5
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family7e-1477.4
NC_011894:1499229:152381215238121524516705Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family8e-1167
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator2e-1065.9
NC_018691:761560:778164778164778892729Alcanivorax dieselolei B5 chromosome, complete genomeGntR-family transcriptional regulator2e-1065.9
NC_006582:4256915:425897342589734259593621Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family2e-1065.5
NC_019970:929666:929666929666930433768Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator3e-1065.5
NC_014410:989698:989698989698990465768Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, GntR family3e-1065.5
NC_016582:10015558:100189221001892210019551630Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator3e-1065.1
NC_014119:977136:993862993862994566705Burkholderia sp. CCGE1002 chromosome chromosome 3, completetranscriptional regulator, GntR family3e-0962
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family5e-0961.2
NC_007963:1190847:121570212157021216370669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family6e-0960.8
NC_010511:6067000:610992561099256110659735Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator7e-0960.5
NC_020911:18500:339013390134626726Octadecabacter antarcticus 307, complete genomeputative GntR family transcriptional regulator1e-0860.1
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator1e-0860.1
NC_014915:1880748:188433518843351885033699Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family1e-0860.1
NC_013411:2739989:274439727443972745095699Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family1e-0860.1
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein1e-0859.7
NC_020210:1908000:192856519285651929263699Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator1e-0859.7
NC_014206:1745203:174693817469381747636699Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator1e-0859.7
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator2e-0859.3
NC_013947:1696671:171062117106211711286666Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family6e-0857.8
NC_008543:323773:326602326602327249648Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, GntR family8e-0857.4
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator7e-0857.4
NC_009328:1867971:186797118679711868669699Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulatory protein7e-0857.4
NC_013740:2218215:222773122277312228360630Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, GntR family8e-0857
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator1e-0756.6
NC_014011:527681:541220541220541882663Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family1e-0756.6
NC_015727:1076927:109922410992241099961738Cupriavidus necator N-1 plasmid BB1p, complete sequenceGntR family transcriptional regulator2e-0756.2
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator1e-0756.2
NC_014098:2332938:234278423427842343536753Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family2e-0755.8
NC_013592:3263005:328412532841253284826702Dickeya dadantii Ech586, complete genometranscriptional regulator, GntR family3e-0755.5
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family3e-0755.5
NC_015379:4426827:444373244437324444415684Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, GntR family3e-0755.1
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family3e-0755.1
NC_003305:1:126631266313373711Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family3e-0755.1
NC_003063:2059311:206138320613832062171789Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein4e-0755.1
NC_020272:20435:418114181142473663Bacillus amyloliquefaciens IT-45, complete genomeputative HTH-type transcriptional regulator YdhC5e-0754.7
NC_012108:3824977:383239938323993833073675Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (GntR family protein)4e-0754.7
NC_020911:3046916:305943830594383060121684Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator6e-0754.3
NC_014632:336000:336166336166336810645Ilyobacter polytropus DSM 2926 chromosome, complete genomeGntR family transcriptional regulator6e-0754.3
NC_012988:4387735:439935343993534400045693Methylobacterium extorquens DM4, complete genomeGntR family transcriptional regulator6e-0754.3
NC_008148:2231045:227183422718342272532699Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family6e-0754.3
NC_014841:131308:133188133188133841654Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, GntR family7e-0753.9
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator9e-0753.9
NC_010511:6169468:619195061919506192657708Methylobacterium sp. 4-46 chromosome, complete genome1e-0653.1
NC_008148:1859888:190316519031651903911747Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family1e-0653.1
NC_008596:4104476:411410641141064114864759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein1e-0653.1
CP002207:1:256072560726266660Bacillus atrophaeus 1942, complete genomehypothetical protein1e-0653.1
NC_014639:1:256072560726266660Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-0653.1
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family2e-0652.8
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family2e-0652.8
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family2e-0652.8
NC_009659:2849000:287099328709932871691699Janthinobacterium sp. Marseille chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_017191:3901914:390191439019143902573660Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator2e-0652.4
NC_014334:37040:521305213052822693Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator2e-0652.4
NC_008596:4043213:404902540490254049669645Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein3e-0652
NC_013526:65495:890168901689705690Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family3e-0651.6
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family4e-0651.6
NC_008786:1507139:153422415342241534952729Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, GntR family4e-0651.6
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family4e-0651.6
NC_018681:2447871:245134424513442451982639Nocardia brasiliensis ATCC 700358 chromosome, complete genomeGntR family transcriptional regulator4e-0651.6
NC_007948:3502843:352215035221503522902753Polaromonas sp. JS666, complete genometranscriptional regulator, GntR family4e-0651.6
NC_013729:4835452:485750648575064858159654Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family5e-0651.2
NC_013947:5546315:554851655485165549172657Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family5e-0651.2
NC_014618:2423661:244155524415552442241687Enterobacter cloacae SCF1 chromosome, complete genomeGntR family transcriptional regulator5e-0651.2
NC_008595:5168941:517071151707115171400690Mycobacterium avium 104, complete genometranscriptional regulator, GntR family protein6e-0650.8
NC_008392:666000:681288681288681968681Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, GntR family6e-0650.8
NC_015057:30743:366533665337351699Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencetranscriptional regulator, GntR family6e-0650.8
NC_016641:4727000:472732347273234728054732Paenibacillus terrae HPL-003 chromosome, complete genomegluconate operon transcriptional repressor7e-0650.8
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator7e-0650.8
NC_014963:3175912:317591231759123176580669Terriglobus saanensis SP1PR4 chromosome, complete genomeGntR family transcriptional regulator8e-0650.4
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family8e-0650.4
NC_016906:3286384:328959032895903290342753Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator9e-0650.4