Pre_GI: BLASTP Hits

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Query: NC_008148:1859888:1885842 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1885842, End: 1886333, Length: 492

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006361:1547034:155446515544651555343879Nocardia farcinica IFM 10152, complete genomeputative transposase4e-1580.5
NC_013929:1611940:162919716291971630030834Streptomyces scabiei 87.22 chromosome, complete genometransposase5e-1580.1
NC_006361:1547034:156463115646311565509879Nocardia farcinica IFM 10152, complete genomeputative transposase1e-1478.6
NC_015434:666692:672984672984673898915Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS4 family protein2e-1478.2
NC_006361:4098469:413085041308504131743894Nocardia farcinica IFM 10152, complete genomeputative transposase6e-1476.6
NC_008148:2498000:252110125211012521577477Rubrobacter xylanophilus DSM 9941, complete genometransposase, IS42e-1375.1
NC_008148:2498000:252929925292992529685387Rubrobacter xylanophilus DSM 9941, complete genomeputative transposase2e-1375.1
NC_003155:5443230:545563154556315456419789Streptomyces avermitilis MA-4680, complete genomeIS1648-like transposase5e-1373.6
NC_015957:115133:126468126468127361894Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein7e-1166.2
NC_008148:2498000:252970325297032530080378Rubrobacter xylanophilus DSM 9941, complete genomeputative transposase1e-1065.5
NC_008148:2498000:252159525215952521972378Rubrobacter xylanophilus DSM 9941, complete genomeTransposase and inactivated derivatives-like protein2e-1065.5
NC_010572:8408500:842315384231538424049897Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS1647-like transposase3e-1064.3
NC_010572:82000:121881121881122777897Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS1647-like transposase3e-1064.3
NC_014391:4672105:467890846789084679801894Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS4 family protein4e-1063.9
NC_014391:4672105:469164646916464692539894Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS4 family protein4e-1063.9
NC_008148:1859888:186634618663461867217872Rubrobacter xylanophilus DSM 9941, complete genome4e-1063.9
NC_010572:82000:875628756288011450Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase1e-0962.4
NC_003155:3994:236752367524559885Streptomyces avermitilis MA-4680, complete genomeIS1647-like transposase1e-0962
NC_015953:6212366:625600562560056256910906Streptomyces sp. SirexAA-E chromosome, complete genometransposase IS4 family protein3e-0960.8
NC_015859:2726414:273945427394542739996543Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element3e-0857.8
NC_010510:388885:406864406864407319456Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completetransposase IS4 family protein3e-0857.8
NC_018681:5627940:564139256413925641877486Nocardia brasiliensis ATCC 700358 chromosome, complete genometransposase3e-0857.8
NC_009953:3509229:352087735208773521239363Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein1e-0755.8
NC_021177:2034722:204778720477872048434648Streptomyces fulvissimus DSM 40593, complete genomeputative is1648 transposase3e-0754.3
NC_013595:7302888:730844873084487309146699Streptosporangium roseum DSM 43021, complete genome5e-0753.5
NC_017186:6395435:644085664408566441359504Amycolatopsis mediterranei S699 chromosome, complete genometransposase IS4 family protein5e-0753.5
NC_017186:5586328:559862155986215599124504Amycolatopsis mediterranei S699 chromosome, complete genometransposase IS4 family protein5e-0753.5
NC_010660:175200:197791197791198306516Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase (IS4 family)1e-0652.8
NC_018750:8210500:822490982249098225718810Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-0650.8
NC_015859:3126500:312940531294053130043639Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element4e-0650.8
NC_014151:3611956:363290036329003633433534Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS4 family protein5e-0650.4