Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:1611940 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161194016132291290glycosyl transferase family proteinQuickGO ontologyBLASTP
16133821614218837fumarylacetoacetate family hydrolaseQuickGO ontologyBLASTP
161424916158201572two component system sensor kinaseQuickGO ontologyBLASTP
16158171616563747two-component system response regulatorQuickGO ontologyBLASTP
161664916184331785hypothetical proteinBLASTP
16184301619107678hypothetical proteinBLASTP
16191041619946843hypothetical proteinBLASTP
16210091621497489hypothetical protein
16216331622235603hypothetical proteinBLASTP
16231591623554396hypothetical proteinBLASTP
162370816249671260monooxygenase P450QuickGO ontologyBLASTP
162572716269621236transporterQuickGO ontologyBLASTP
16274351627770336BLASTP
16277611627940180hypothetical protein
16280901628329240hypothetical protein
16286701629014345hypothetical proteinBLASTP
16291971630030834transposaseQuickGO ontologyBLASTP
16301011630409309hypothetical proteinBLASTP
16312111631720510hypothetical proteinBLASTP
16316711631952282hypothetical proteinBLASTP
163218916334301242hypothetical proteinBLASTP
163367716353291653hypothetical proteinBLASTP
163533116366171287hypothetical proteinBLASTP
163675716380101254oxidoreductaseQuickGO ontologyBLASTP
163861116401431533IS transposaseQuickGO ontologyBLASTP
16403801640640261hypothetical proteinBLASTP
16407791641660882hypothetical proteinBLASTP
16420071642780774oxidoreductaseQuickGO ontologyBLASTP
164278216442541473dioxygenaseQuickGO ontologyBLASTP
16445421645393852hypothetical proteinBLASTP
16462271646583357hypothetical proteinBLASTP
16476251648503879esteraseQuickGO ontologyBLASTP
16486601649157498hypothetical proteinBLASTP
164940616509711566hypothetical proteinBLASTP
165103516521771143luciferase-like monooxygenaseQuickGO ontologyBLASTP
165229316536091317oxidoreductaseQuickGO ontologyBLASTP
16536091654421813hypothetical proteinBLASTP
16544381655214777hypothetical proteinBLASTP
165536316564931131hypothetical proteinBLASTP
165656716581351569aldehyde dehydrogenaseQuickGO ontologyBLASTP
16588321659545714hypothetical proteinBLASTP
166017716613191143hypothetical proteinBLASTP
166142816631971770membrane transporterQuickGO ontologyBLASTP
16631781663627450hypothetical proteinBLASTP