Pre_GI: BLASTP Hits

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Query: NC_008146:4019711:4037766 Mycobacterium sp. MCS, complete genome

Start: 4037766, End: 4039547, Length: 1782

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4053070:4072248407224840740291782Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein01105
NC_009077:5286275:5287065528706552888251761Mycobacterium sp. JLS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein8e-110397
NC_008705:4975402:4978211497821149799711761Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-109397
NC_008146:4936262:4939191493919149408311641Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein1e-109397
NC_016887:511034:5273145273145290141701Nocardia cyriacigeorgica GUH-2, complete genome3-ketosteroid-delta-1-dehydrogenase4e-101369
NC_010512:951527:9746489746489763571710Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein domain protein7e-83308
NC_009921:5609770:5632068563206856337621695Frankia sp. EAN1pec, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-76287
NC_014246:57021:6074260742625501809Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative 3-oxosteroid 1-dehydrogenase3e-71270
NC_007974:2048000:2090060209006020917631704Ralstonia metallidurans CH34 chromosome 2, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein-like protein4e-71269
NC_017986:5605197:5633030563303056347451716Pseudomonas putida ND6 chromosome, complete genomePutative succinate dehydrogenase8e-70265
NC_020126:6190662:6190662619066261923171656Myxococcus stipitatus DSM 14675, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein1e-61238
NC_007951:925442:9468139468139486031791Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dehydrogenase4e-61236
NC_007953:504939:5224405224405241221683Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative dehydrogenase flavoprotein2e-60234
NC_007974:2097334:2155187215518721568541668Ralstonia metallidurans CH34 chromosome 2, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein-like protein3e-60233
NC_015957:5082172:5102091510209151038121722Streptomyces violaceusniger Tu 4113 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein3e-52207
NC_007517:2515870:2516692251669225183021611Geobacter metallireducens GS-15, complete genomeFumarate reductase/succinate dehydrogenase flavoprotein-like2e-40167
NC_013165:1584977:1586305158630515879781674Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit2e-26121
NC_014220:1732254:1743412174341217451151704Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSuccinate dehydrogenase7e-23109
NC_015732:2735753:2737027273702727387661740Spirochaeta caldaria DSM 7334 chromosome, complete genomeflavocytochrome c1e-21105
NC_015422:4508028:4518046451804645197851740Alicycliphilus denitrificans K601 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein2e-20101
NC_014152:241776:2514472514472531591713Thermincola sp. JR, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein4e-1893.2
NC_018524:4564493:4579050457905045805221473Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain protein9e-1892.4
NC_013171:416279:4282224282224299971776Anaerococcus prevotii DSM 20548, complete genomeflavocytochrome c3e-1687.4
NC_014541:2510819:2531525253152525332911767Ferrimonas balearica DSM 9799 chromosome, complete genomeflavocytochrome c8e-1685.9
NC_009092:3682413:3693260369326036950501791Shewanella loihica PV-4, complete genomeflavocytochrome c1e-1585.1
NC_013204:799857:7998577998578015451689Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1584.7
NC_016887:511034:5291575291575307971641Nocardia cyriacigeorgica GUH-2, complete genomeFumarate reductase/succinate dehydrogenase flavoprotein-like protein3e-1584
NC_014328:3336000:3340834334083433436142781Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein2e-1481.3
NC_014328:938393:9563509563509578101461Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative reductase flavoprotein subunit3e-1480.5
NC_010511:2163570:2163570216357021649641395Methylobacterium sp. 4-46 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein3e-1480.5
NC_011830:1190502:1193582119358211953781797Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein4e-1480.5
NC_011830:4187362:4202017420201742037501734Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-1479.7
NC_015391:2488450:2489432248943224909341503Carnobacterium sp. 17-4 chromosome, complete genomeL-aspartate oxidase9e-1479
NC_013971:1660144:1660144166014416629212778Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH:flavin oxidoreductase2e-1377.8
NC_013961:1622616:1622616162261616253932778Erwinia amylovora, complete genomefumarate reductase flavoprotein subunit2e-1377.8
NC_014727:995480:1014770101477010161641395Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fumarate reductase, flavoprotein subunit4e-1377
NC_012214:2221702:2266941226694122697182778Erwinia pyrifoliae Ep1/96, complete genomeFlavocytochrome c7e-1376.3
NC_015602:1810500:1824768182476818266181851Lactobacillus kefiranofaciens ZW3 chromosome, complete genomesuccinate dehydrogenase5e-1273.2
NC_014618:1809369:1809369180936918121462778Enterobacter cloacae SCF1 chromosome, complete genomeflavocytochrome c7e-1272.8
NC_009922:411434:4437664437664455291764Alkaliphilus oremlandii OhILAs, complete genomeflavocytochrome c8e-1272.4
NC_010814:1336943:1344729134472913464381710Geobacter lovleyi SZ, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1172.4
NC_006814:51500:6595665956671461191Lactobacillus acidophilus NCFM, complete genomefumarate reductase flavoprotein subunit3e-1170.9
NC_015738:2773552:2780732278073227824051674Eggerthella sp. YY7918, complete genomehypothetical protein3e-1170.5
NC_010694:2138000:2178003217800321807802778Erwinia tasmaniensis, complete genomePutative NADH:flavin oxidoreductase5e-1170.1
NC_009802:1659257:1674756167475616762911536Campylobacter concisus 13826, complete genomeflavoCytochrome c flavin subunit5e-1169.7
NC_015738:629297:6345956345956362651671Eggerthella sp. YY7918, complete genomesuccinate dehydrogenase1e-1068.9
NC_013204:2955500:2964079296407929657461668Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1068.9
NC_013204:74855:9579995799973371539Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1068.9
NC_013204:799857:8028138028138046121800Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1067.8
NC_008322:2637646:2645436264543626469561521Shewanella sp. MR-7, complete genomeflavocytochrome c4e-1067
NC_009921:3551036:3594355359435535958031449Frankia sp. EAN1pec, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-0965.5
NC_014724:59000:7385773857757161860Lactobacillus amylovorus GRL 1112 chromosome, complete genomefumarate reductase flavoprotein subunit1e-0965.5
NC_008321:2569315:2577100257710025786201521Shewanella sp. MR-4, complete genomeflavocytochrome c2e-0964.7
NC_015214:48999:6352863528652371710Lactobacillus acidophilus 30SC chromosome, complete genomefumarate reductase flavoprotein subunit2e-0964.7
NC_008054:930890:9370839370839385521470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)3e-0964.3
NC_008054:930890:9468849468849483531470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)3e-0964.3
NC_015738:2773552:2786784278678427885411758Eggerthella sp. YY7918, complete genomehypothetical protein3e-0964.3
NC_011830:633195:6342336342336362061974Desulfitobacterium hafniense DCB-2, complete genomeFMN-binding domain protein4e-0963.5
NC_015724:129331:1459111459111473741464Cupriavidus necator N-1 plasmid BB2p, complete sequencefumarate reductase flavoprotein subunit2e-0861.2
NC_014364:894373:8993928993929016082217Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-0860.8
NC_008529:906576:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_008529:887008:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_008529:918277:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_008529:887008:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_008529:906576:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_008529:918277:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-0758.5
NC_009092:3783000:3786798378679837884651668Shewanella loihica PV-4, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-0758.2
NC_008054:1649160:165578416557841656572789Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete9e-0755.8
NC_015379:2505233:2505233250523325066871455Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase2e-0654.7
NC_013165:2700978:2702900270290027046211722Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit8e-0652.8