Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1955576 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1955576, End: 1957165, Length: 1590

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007947:1556437:1579694157969415811931500Methylobacillus flagellatus KT, complete genomeGlycogen/starch synthases, ADP-glucose type5e-102372
NC_007626:2283793:2285254228525422867381485Magnetospirillum magneticum AMB-1, complete genomeGlycogen synthase8e-96351
NC_004757:2451919:2453578245357824550651488Nitrosomonas europaea ATCC 19718, complete genomeGlycosyl transferase group 18e-94344
NC_008563:3843859:3861546386154638629791434Escherichia coli APEC O1, complete genomeglycogen synthase GlgA3e-93342
NC_011751:3984236:4000138400013840015711434Escherichia coli UMN026 chromosome, complete genomeglycogen synthase3e-93342
NC_008253:3666387:3682499368249936839321434Escherichia coli 536, complete genomeglycogen synthase3e-93342
NC_004431:3986472:4002585400258540040181434Escherichia coli CFT073, complete genomeglycogen synthase3e-93342
NC_011742:3758618:3776297377629737777301434Escherichia coli S88 chromosome, complete genomeglycogen synthase3e-93342
NC_011745:3992434:4009638400963840110711434Escherichia coli ED1a chromosome, complete genomeglycogen synthase3e-93342
NC_007946:3811082:3828762382876238301951434Escherichia coli UTI89, complete genomeglycogen synthase1e-92341
NC_011740:3453455:3472180347218034736131434Escherichia fergusonii ATCC 35469, complete genomeglycogen synthase2e-92340
NC_013854:330543:3467703467703482391470Azospirillum sp. B510, complete genomestarch synthase6e-91335
NC_012214:3750649:3767334376733437687671434Erwinia pyrifoliae Ep1/96, complete genomeGlycogen synthase6e-91335
NC_015968:4389871:4408258440825844096911434Enterobacter asburiae LF7a chromosome, complete genomeglycogen synthase8e-91334
NC_007958:396439:3977363977363991841449Rhodopseudomonas palustris BisB5, complete genomeGlycogen/starch synthases, ADP-glucose type2e-89330
NC_015696:1853979:1858621185862118600781458Francisella sp. TX077308 chromosome, complete genomeglycogen synthase, ADP-glucose transglucosylase1e-81304
NC_014614:1090000:1112301111230111137371437Clostridium sticklandii, complete genomeglycogen synthase3e-80299
NC_013209:2248119:2264007226400722656351629Acetobacter pasteurianus IFO 3283-01, complete genomeglycogen/starch synthase1e-79298
NC_017111:2248096:2263984226398422656121629Acetobacter pasteurianus IFO 3283-32, complete genomeglycogen/starch synthase1e-79298
NC_012808:1920500:1931700193170019331571458Methylobacterium extorquens AM1, complete genomeglycogen synthase6e-80298
NC_011567:388358:4129524129524144061455Anoxybacillus flavithermus WK1, complete genomeGlycogen synthase6e-80298
NC_008343:2589680:2589680258968025911221443Granulibacter bethesdensis CGDNIH1, complete genomeglycogen synthase3e-79296
NC_008340:1075500:1091479109147910929301452Alkalilimnicola ehrlichei MLHE-1, complete genomeglycogen/starch synthases, ADP-glucose type1e-78294
NC_004722:4767294:4788992478899247904221431Bacillus cereus ATCC 14579, complete genomeglycogen synthase2e-76287
NC_003366:64908:8253282532839801449Clostridium perfringens str. 13, complete genomeglycogen synthase4e-76286
NC_011969:4556296:4579338457933845807681431Bacillus cereus Q1 chromosome, complete genomeglycogen synthase2e-76286
NC_017243:2190000:2200440220044022019331494Brachyspira intermedia PWS/A chromosome, complete genomeglycogen synthase5e-72272
NC_019908:1043401:1064109106410910656021494Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycogen/starch synthase5e-70265
NC_020291:6216000:6244852624485262462911440Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycogen synthase GlgA1e-69264
NC_010674:3581044:3601280360128036027161437Clostridium botulinum B str. Eklund 17B, complete genomeglycogen synthase1e-69264
NC_016751:1524848:1543751154375115452081458Marinitoga piezophila KA3 chromosome, complete genomeglycogen/starch synthase2e-69263
NC_010723:3395187:3415364341536434168001437Clostridium botulinum E3 str. Alaska E43, complete genomeglycogen synthase2e-69263
NC_021171:2562000:2584880258488025863461467Bacillus sp. 1NLA3E, complete genomeglycogen synthase5e-69262
NC_013946:305364:3189153189153202581344Meiothermus ruber DSM 1279 chromosome, complete genomeglycogen/starch synthase ADP-glucose type3e-67256
NC_007776:1797699:1816003181600318175441542Synechococcus sp. JA-2-3B'a(2-13), complete genomeglycogen/starch synthase, ADP-glucose type4e-66252
NC_014976:1174430:1174430117443011758841455Bacillus subtilis BSn5 chromosome, complete genomeglycogen synthase9e-66251
NC_015275:1223088:1225352122535212268121461Clostridium lentocellum DSM 5427 chromosome, complete genomeGlycogen synthase2e-64246
NC_014657:473479:4734794734794749151437Caldicellulosiruptor owensensis OL chromosome, complete genomeglycogen/starch synthase, ADP-glucose type5e-64245
NC_004193:375416:4366754366754381081434Oceanobacillus iheyensis HTE831, complete genomebacterial glycogen synthase5e-62239
NC_014625:1903277:1917332191733219188131482Ketogulonicigenium vulgare Y25 chromosome, complete genomeglycogen/starch synthase4e-61236
NC_007484:79413:1009341009341023971464Nitrosococcus oceani ATCC 19707, complete genomeglycogen synthase1e-55218
NC_010475:2188827:2208456220845622099281473Synechococcus sp. PCC 7002, complete genomeglycogen synthase 2 (Starch [bacterialglycogen] synthase 2)3e-47190
NC_011884:1821862:1842590184259018440681479Cyanothece sp. PCC 7425, complete genomeglycogen/starch synthase, ADP-glucose type5e-47189
NC_009943:970901:9906819906819922011521Candidatus Desulfococcus oleovorans Hxd3, complete genomeStarch synthase catalytic domain protein9e-30132
NC_014472:791855:8005108005108020541545Flavobacteriales bacterium HTCC2170 chromosome, complete genomeglycogen synthase3e-24113
NC_014122:205112:2111112111112126401530Methanocaldococcus infernus ME chromosome, complete genomeglycosyl transferase group 11e-21104
NC_014961:741209:7533757533757549251551Desulfurococcus mucosus DSM 2162 chromosome, complete genomegroup 1 glycosyl transferase2e-1584.3
NC_014759:2438492:243765724376572438535879Marivirga tractuosa DSM 4126 chromosome, complete genomeglycogen synthase (udp-glucose)4e-1170.1
NC_009051:1242351:1246666124666612478381173Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 12e-1068.2
NC_019940:1:1618316183174541272Thioflavicoccus mobilis 8321 chromosome, complete genomeglycosyltransferase1e-0655.5
NC_004369:437594:4566284566284579021275Corynebacterium efficiens YS-314, complete genomehypothetical protein7e-0652.8