Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:1971584:1973776 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1973776, End: 1974135, Length: 360

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017192:276187:295772295772296125354Arcobacter sp. L, complete genomehypothetical protein9e-1785.5
NC_010067:3310336:331101833110183311533516Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1063.2
NC_010511:2079744:208233420823342082705372Methylobacterium sp. 4-46 chromosome, complete genomeLrgA family protein2e-0754.7
NC_008740:443274:511066511066511431366Marinobacter aquaeolei VT8, complete genomeLrgA4e-0753.1
NC_017316:2581781:259714325971432597562420Enterococcus faecalis OG1RF chromosome, complete genomemurein hydrolase regulator LrgA6e-0752.8
NC_004668:3053119:306744730674473067866420Enterococcus faecalis V583, complete genomemurein hydrolase regulator LrgA8e-0752.4
NC_008261:2481500:248153124815312481908378Clostridium perfringens ATCC 13124, complete genomelrgA family protein2e-0651.2
NC_003366:2266757:226768722676872268064378Clostridium perfringens str. 13, complete genomehypothetical protein2e-0651.2
NC_008262:2150944:215094421509442151321378Clostridium perfringens SM101, complete genomelrgA family protein3e-0650.4
NC_011094:4361238:440083344008334401348516Salmonella enterica subsp. enterica serovar Schwarzengrund strLrgA family protein6e-0649.7
NC_006905:4405301:444499444449944445404411Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein7e-0649.3
NC_016612:1790256:179284317928431793253411Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLrgA family protein9e-0648.9