Pre_GI: BLASTP Hits

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Query: NC_007948:5026122:5045115 Polaromonas sp. JS666, complete genome

Start: 5045115, End: 5046236, Length: 1122

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004757:2730057:2738984273898427401081125Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein2e-149528
NC_003295:3688000:3689968368996836910831116Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-145515
NC_009429:686608:6944836944836955801098Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein3e-134478
NC_015458:2338437:2355979235597923571061128Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein6e-133474
NC_009445:6621996:6649106664910666502361131Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein3e-127454
NC_011883:2826000:2836832283683228379471116Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,filamentation induced by cAMP protein Fic8e-127453
NC_009485:3461051:3469791346979134709211131Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein2e-126452
NC_006677:1596560:1662771166277116639041134Gluconobacter oxydans 621H, complete genomehypothetical protein1e-124446
NC_020156:3157899:3174617317461731757381122Nonlabens dokdonensis DSW-6, complete genomefilamentation induced by cAMP protein Fic3e-121435
NC_014006:2932959:2942921294292129440331113Sphingobium japonicum UT26S chromosome 1, complete genomecell filamentation protein9e-120430
NC_014355:1223243:1228731122873112298371107Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-119430
NC_015577:3113907:3120238312023831213561119Treponema azotonutricium ZAS-9 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-101370
NC_014365:2888897:2890549289054928916761128Desulfarculus baarsii DSM 2075 chromosome, complete genomefilamentation induced by cAMP protein Fic8e-101367
NC_012918:928903:9782049782049793281125Geobacter sp. M21 chromosome, complete genomefilamentation induced by cAMP protein fic1e-100366
NC_009524:861500:8647308647308658511122Psychrobacter sp. PRwf-1 chromosome, complete genomefilamentation induced by cAMP protein fic7e-100364
NC_008463:632869:6387376387376398581122Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-85316
NC_016745:2161408:2167272216727221682761005Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein4e-81301
NC_016628:133841:1493281493281504401113Vibrio furnissii NCTC 11218 chromosome 2, complete sequencefilamentation induced by cAMP protein fic3e-78292
NC_004578:568236:5711965711965723261131Pseudomonas syringae pv. tomato str. DC3000, complete genomeFic family protein2e-76286
NC_016901:414670:4146704146704157971128Shewanella baltica OS678 chromosome, complete genomefilamentation induced by cAMP protein fic6e-75281
NC_009997:415808:4158084158084169351128Shewanella baltica OS195, complete genomefilamentation induced by cAMP protein Fic6e-75281
NC_010125:1:4883488370582176Gluconacetobacter diazotrophicus PAl 5, complete genome3e-65249
NC_017098:32196:4810948109492151107Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein7e-60231
NC_008347:2515921:2525126252512625262561131Maricaulis maris MCS10, complete genomefilamentation induced by cAMP protein Fic5e-60231
NC_009937:4392108:4408013440801344091161104Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein3e-53209
NC_006677:1503513:1516480151648015175831104Gluconobacter oxydans 621H, complete genomehypothetical protein3e-47189
NC_015730:3693391:371633137163313717223893Roseobacter litoralis Och 149 chromosome, complete genome3e-31136
NC_016901:414670:417333417333417821489Shewanella baltica OS678 chromosome, complete genome1e-29130
NC_009997:415808:418504418504418959456Shewanella baltica OS195, complete genomefilamentation induced by cAMP protein Fic3e-24113
NC_014632:1112733:1114065111406511152551191Ilyobacter polytropus DSM 2926 chromosome, complete genomefilamentation induced by cAMP protein fic2e-1687
NC_013158:1905643:1910894191089419120781185Halorhabdus utahensis DSM 12940, complete genomefilamentation induced by cAMP protein Fic1e-1171.2
NC_013959:2449315:2469457246945724705811125Sideroxydans lithotrophicus ES-1 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-1170.5
NC_015737:449914:4639074639074649561050Clostridium sp. SY8519, complete genomehypothetical protein1e-1067.8
NC_002929:3305682:3323236332323633242821047Bordetella pertussis Tohama I, complete genomehypothetical protein2e-1067.4
NC_017223:3345902:3363456336345633645021047Bordetella pertussis CS chromosome, complete genomehypothetical protein2e-1067.4
NC_002608:268000:2806762806762819501275Halobacterium sp. NRC-1 plasmid pNRC200, complete sequencehypothetical protein2e-1067.4
NC_002927:960369:9675889675889686341047Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-1066.6
NC_017059:1972895:1976297197629719774811185Rhodospirillum photometricum DSM 122, complete genomeFilamentation induced by cAMP protein Fic3e-1066.6
NC_009434:3434381:3439457343945734405181062Pseudomonas stutzeri A1501, complete genomefic family protein4e-1065.9
NC_014844:511552:5216845216845228621179Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-0964.7
NC_017219:2646157:2686768268676826878381071Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-0964.3
NC_011593:2650156:2690767269076726918371071Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,filamentation induced by cAMP protein fic1e-0964.3
NC_015554:1215401:1235142123514212362211080Alteromonas sp. SN2 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-0964.3
NC_015574:228948:2289482289482300721125Methanobacterium sp. SWAN-1 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0963.9
NC_015730:1107840:1124793112479311258451053Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein2e-0963.9
NC_015436:1758257:1773078177307817741331056Spirochaeta coccoides DSM 17374 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0963.5
NC_002939:173833:1838831838831850491167Geobacter sulfurreducens PCA, complete genomeFic family protein3e-0963.2
NC_018750:4333064:4343077434307743442551179Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-0963.2
NC_014364:773500:7854007854007865901191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefilamentation induced by cAMP protein Fic3e-0963.2
NC_014814:5422972:5455068545506854562791212Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein3e-0963.2
NC_012969:2476318:2486685248668524878211137Methylovorus glucosetrophus SIP3-4 chromosome, complete genomefilamentation induced by cAMP protein Fic4e-0962.8
NC_003064:22535:3954739547407281182Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-0962.8
NC_003306:22228:3924039240404211182Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-0962.8
NC_013061:1052957:1057359105735910584021044Pedobacter heparinus DSM 2366, complete genomefilamentation induced by cAMP protein Fic5e-0962.4
NC_012489:209016:2190002190002203611362Gemmatimonas aurantiaca T-27, complete genomehypothetical protein7e-0962
NC_012780:189949:1934311934311945761146Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein8e-0961.6
NC_018867:1837941:1863991186399118651421152Dehalobacter sp. CF chromosome, complete genomeMloA8e-0961.6
NC_011663:4943179:4954929495492949562991371Shewanella baltica OS223 chromosome, complete genomefilamentation induced by cAMP protein fic1e-0861.6
NC_019962:2736815:2751080275108027522371158Natrinema pellirubrum DSM 15624, complete genomehypothetical protein1e-0861.2
NC_009792:3225965:3232343323234332334431101Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0860.8
NC_006347:4378684:4393520439352043946531134Bacteroides fragilis YCH46, complete genomehypothetical protein2e-0860.5
NC_016901:2594942:2618421261842126197911371Shewanella baltica OS678 chromosome, complete genomefilamentation induced by cAMP protein fic2e-0860.5
NC_009997:2635025:2658417265841726598741458Shewanella baltica OS195, complete genomefilamentation induced by cAMP protein Fic2e-0860.5
NC_010612:681544:6884416884416896551215Mycobacterium marinum M, complete genomehypothetical protein3e-0860.1
NC_009455:173374:1963541963541975081155Dehalococcoides sp. BAV1 chromosome, complete genomefilamentation induced by cAMP protein fic3e-0860.1
NC_008609:112340:1126921126921137411050Pelobacter propionicus DSM 2379, complete genomefilamentation induced by cAMP protein Fic2e-0860.1
NC_014836:2620871:2626075262607526272291155Desulfurispirillum indicum S5 chromosome, complete genomefilamentation induced by cAMP protein Fic3e-0859.7
NC_013510:5394432:542776054277605428608849Thermomonospora curvata DSM 43183, complete genomefilamentation induced by cAMP protein Fic3e-0859.7
NC_009051:2097271:2106187210618721074671281Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic4e-0859.3
NC_008942:875060:902927902927903913987Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-0859.3
NC_008786:4579490:4582999458299945840541056Verminephrobacter eiseniae EF01-2, complete genomefilamentation induced by cAMP protein Fic6e-0858.9
NC_009051:2240480:2251990225199022531441155Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic1e-0757.8
NC_012560:5019900:5039177503917750407061530Azotobacter vinelandii DJ, complete genomefilamentation induced by cAMP protein2e-0757.4
NC_021150:5019887:5039164503916450406931530Azotobacter vinelandii CA6, complete genomefilamentation induced by cAMP protein2e-0757.4
NC_011149:4677412:470600047060004706932933Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0757
NC_014814:483444:4873754873754885591185Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein3e-0756.6
NC_019902:2306961:2306961230696123080191059Thioalkalivibrio nitratireducens DSM 14787, complete genomefilamentation induced by cAMP protein Fic3e-0756.6
NC_018868:1352000:1355293135529313563991107Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomefilamentation induced by cAMP protein fic6e-0755.5
NC_020411:90538:9632996329974411113Hydrogenobaculum sp. HO, complete genomefilamentation induced by cAMP protein Fic7e-0755.5
NC_015587:90539:9633096330974421113Hydrogenobaculum sp. SHO chromosome, complete genomefilamentation induced by cAMP protein Fic7e-0755.5
NC_015557:90503:9629496294974061113Hydrogenobaculum sp. 3684 chromosome, complete genomefilamentation induced by cAMP protein Fic7e-0755.5
NC_010545:83353:9076090760920431284Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-0654.3
NC_014365:2810405:2820776282077628219421167Desulfarculus baarsii DSM 2075 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0653.9
NC_009523:341347:3480283480283491911164Roseiflexus sp. RS-1 chromosome, complete genomefilamentation induced by cAMP protein fic5e-0652.4
NC_008702:2520500:2522542252254225237621221Azoarcus sp. BH72, complete genomeconserved hypothetical protein5e-0652.4
NC_015424:3520783:3554555355455535555831029Aeromonas veronii B565 chromosome, complete genomeFilamentation induced by cAMP protein Fic6e-0652.4
NC_009051:1455183:1460449146044914615581110Methanoculleus marisnigri JR1, complete genomefilamentation induced by cAMP protein Fic1e-0551.6