Pre_GI: BLASTP Hits

Some Help

Query: NC_007948:4646344:4660047 Polaromonas sp. JS666, complete genome

Start: 4660047, End: 4661423, Length: 1377

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:2282488:2324124232412423255151392Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulfide oxidoreductase8e-128457
NC_007948:4620661:4641535464153546429561422Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region3e-102372
NC_011982:206784:2261742261742275681395Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase3e-95349
NC_015724:339500:3523083523083537681461Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit A2e-93343
NC_007948:4646344:4671121467112146726051485Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region2e-93342
NC_007948:4558000:4578122457812245795131392Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region3e-91335
NC_010676:2793237:2820879282087928222941416Burkholderia phytofirmans PsJN chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein1e-79297
NC_003065:27163:6167661676630941419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit A6e-75281
NC_003308:1:2827328273296911419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase6e-75281
NC_003037:1245645:1245645124564512470211377Sinorhizobium meliloti 1021 plasmid pSymA, complete sequenceputative opine oxidase subunit4e-73275
NC_011883:2031222:2031523203152320329111389Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,BFD domain protein (2Fe-2S)-binding domain protein1e-70267
NC_011144:2674242:2692785269278526941431359Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase, subunit alpha2e-69263
NC_007005:2686551:2709105270910527104961392Pseudomonas syringae pv. syringae B728a, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region3e-55216
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase8e-43175
NC_005773:5684000:5705088570508857064971410Pseudomonas syringae pv. phaseolicola 1448A, complete genomepyridine nucleotide-disulphide oxidoreductase family protein1e-42174
NC_008391:2404443:2417162241716224186071446Burkholderia cepacia AMMD chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein6e-39162
NC_008027:5842740:5845435584543558468291395Pseudomonas entomophila L48, complete genomehydrogene cyanide synthase HcnB2e-30133
NC_007492:3954345:3994946399494639963551410Pseudomonas fluorescens PfO-1, complete genomeBFD-like (2Fe-2S)-binding region1e-29131
NC_014815:4621552:4648390464839046497751386Micromonospora sp. L5 chromosome, complete genomebfd domain protein (2fe-2S)-binding domain protein3e-27123
NC_020829:809457:8094578094578107041248Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-25115
NC_012483:3731542:3797136379713637984281293Acidobacterium capsulatum ATCC 51196, complete genomepyridine nucleotide-disulfide oxidoreductase3e-24113
NC_015566:1941407:1942781194278119440431263Serratia sp. AS12 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-20100
NC_015172:1075592:1106628110662811077281101Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-1997.1
NC_013947:4363250:4378871437887143803761506Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeBFD domain-containing protein (2Fe-2S)-binding domain-containing protein3e-1997.1
NC_020291:5409587:5420695542069554222721578Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-1893.6
NC_021184:2936244:2946110294611029477021593Desulfotomaculum gibsoniae DSM 7213, complete genomethioredoxin reductase4e-1893.2
NC_020064:1854589:1855942185594218572011260Serratia marcescens FGI94, complete genomeNAD(FAD)-dependent dehydrogenase8e-1788.6
NC_014364:3001597:3025981302598130276391659Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1687.4
NC_015737:2691246:2691246269124626928201575Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase5e-1685.9
NC_009952:2217877:2243321224332122463233003Dinoroseobacter shibae DFL 12, complete genomesarcosine oxidase subunit alpha1e-1584.7
NC_013522:991649:1014925101492510160161092Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-1481.3
NC_010623:1871492:1894975189497518964891515Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-1480.5
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha4e-1479.7
NC_003413:1666520:1667150166715016685741425Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase subunit alpha6e-1479.3
NC_020210:3341976:3351474335147433525621089Geobacillus sp. GHH01, complete genomehypothetical protein2e-1377.4
NC_015474:301428:3014283014283028641437Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase, subunit alpha3e-1377
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-1376.3
NC_013522:991649:101408410140841014410327Thermanaerovibrio acidaminovorans DSM 6589, complete genomeBFD domain protein (2Fe-2S)-binding domain protein7e-1375.9
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase2e-1273.9
NC_015172:1075592:110586111058611106631771Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein3e-1273.6
NC_021184:2936244:294547029454702945820351Desulfotomaculum gibsoniae DSM 7213, complete genomeNAD(P)H-nitrite reductase5e-1272.8
NC_016641:2773757:2786959278695927881821224Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein6e-1272.4
NC_000961:1532245:153419315341931534459267Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0964.7
NC_020291:5409587:542035454203545420683330Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeNAD(P)H-nitrite reductase2e-0963.9
NC_009328:3322802:333193233319323332267336Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein6e-0962.4
NC_013926:71186:859268592686207282Aciduliprofundum boonei T469 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein1e-0861.2
NC_008343:88184:8818488184911712988Granulibacter bethesdensis CGDNIH1, complete genomesarcosine oxidase alpha subunit2e-0860.5
NC_015425:2528549:2543822254382225450811260Clostridium botulinum BKT015925 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase8e-0858.9
NC_008593:2281896:2293515229351522947741260Clostridium novyi NT, complete genomesarcosine oxidase alpha subunit9e-0858.5
NC_016641:2773757:278620827862082786630423Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-0758.5
NC_000868:318434:321009321009321275267Pyrococcus abyssi GE5, complete genomehypothetical protein7e-0755.5
NC_003910:4234000:4240547424054742435703024Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, alpha subunit9e-0755.5
NC_003910:2588000:2596916259691625999393024Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, alpha subunit9e-0755.5
NC_015474:301428:303364303364303627264Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-0655.1
NC_010723:1014334:1021805102180510232351431Clostridium botulinum E3 str. Alaska E43, complete genomeglycerol-3-phosphate dehydrogenase, glpa3e-0653.9
NC_014364:3001597:302571530257153025984270Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein2e-0653.9
NC_003413:1666520:166907416690741669334261Pyrococcus furiosus DSM 3638, complete genomed-nopaline dehydrogenase3e-0653.5
NC_012225:2247796:2255279225527922565531275Brachyspira hyodysenteriae WA1, complete genomepyridine nucleotide-disulphide oxidoreductase4e-0653.1
NC_014654:1802007:1809804180980418112791476Halanaerobium sp. 'sapolanicus' chromosome, complete genomeFAD dependent oxidoreductase6e-0652.8
NC_018604:2350054:2358873235887323601471275Brachyspira pilosicoli WesB complete genomesarcosine oxidase subunit alpha7e-0652.4
NC_019908:2312194:2322020232202023232941275Brachyspira pilosicoli P43/6/78 chromosome, complete genomesarcosine oxidase subunit alpha8e-0652
NC_014330:888366:8970908970908983641275Brachyspira pilosicoli 95/1000 chromosome, complete genomesarcosine oxidase subunit alpha9e-0652