Pre_GI: BLASTP Hits

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Query: NC_007492:857428:875977 Pseudomonas fluorescens PfO-1, complete genome

Start: 875977, End: 876957, Length: 981

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:5442000:545084254508425451822981Pseudomonas putida W619, complete genomephage integrase2e-130465
NC_010501:734363:757539757539758519981Pseudomonas putida W619, complete genomephage integrase2e-128459
NC_020209:5077410:5090808509080850925711764Pseudomonas poae RE*1-1-14, complete genomephage integrase3e-128457
NC_016830:381049:392430392430393407978Pseudomonas fluorescens F113 chromosome, complete genomephage integrase2e-127455
NC_017986:1885613:190477419047741905754981Pseudomonas putida ND6 chromosome, complete genomephage integrase family protein7e-127453
NC_007404:974461:100104010010401001963924Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein4e-43175
NC_011083:1524337:153674015367401537705966Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage integrase family protein1e-37156
NC_017986:1885613:189024518902451891219975Pseudomonas putida ND6 chromosome, complete genomeputative phage integrase3e-2099.4
NC_009512:755658:763489763489763653165Pseudomonas putida F1, complete genome8e-1994.7
NC_007520:903799:905931905931906827897Thiomicrospira crunogena XCL-2, complete genomehypothetical protein1e-1894
NC_008740:1484531:149853214985321499452921Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-1893.2
NC_012660:5793200:580167858016785802652975Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase1e-1377.4
NC_007761:2071500:207329720732972074172876Rhizobium etli CFN 42, complete genomeputative integrase protein3e-1169.3
NC_009445:6621996:666222866622286663148921Bradyrhizobium sp. ORS 278 chromosome, complete genomeDNA breaking-rejoining protein9e-1168.2
NC_017223:3345902:335150233515023352203702Bordetella pertussis CS chromosome, complete genome8e-0961.6
NC_002929:3305682:331128233112823311983702Bordetella pertussis Tohama I, complete genome8e-0961.6
NC_014394:1626699:1642255164225516433551101Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein4e-0859.3
NC_007484:667879:674774674774675640867Nitrosococcus oceani ATCC 19707, complete genomeputative integrase3e-0859.3
NC_009434:3434381:345266034526603453523864Pseudomonas stutzeri A1501, complete genomeintegrase5e-0858.9
NC_007948:1574881:1605461160546116069241464Polaromonas sp. JS666, complete genomehypothetical protein4e-0755.8
NC_016589:2312570:2331191233119123324501260Burkholderia sp. YI23 chromosome 1, complete sequenceFis family transcriptional regulator5e-0652