Pre_GI: BLASTP Hits

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Query: NC_007492:6372900:6409988 Pseudomonas fluorescens PfO-1, complete genome

Start: 6409988, End: 6411673, Length: 1686

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:6334735:6342781634278163444721692Pseudomonas syringae pv. tomato str. DC3000, complete genometransposition protein, TnsD-related protein2e-146520
NC_016616:1091606:1125140112514011269121773Dechlorosoma suillum PS chromosome, complete genomehypothetical protein7e-54212
NC_011206:123791:1334731334731350741602Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein3e-26120
NC_015958:2174731:2180905218090521827911887Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTn7-like transposition protein D3e-21103
NC_014657:2127500:2132524213252421344011878Caldicellulosiruptor owensensis OL chromosome, complete genometn7-like transposition protein d8e-21102
NC_013921:1915377:1920550192055019224391890Thermoanaerobacter italicus Ab9 chromosome, complete genomeTn7-like transposition protein D2e-1997.8
NC_010501:5735656:5747606574760657490751470Pseudomonas putida W619, complete genomehypothetical protein1e-1584.7
NC_020050:1:2404924049253861338Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialhypothetical protein4e-1583.6
NC_007492:6372900:6411722641172264134311710Pseudomonas fluorescens PfO-1, complete genomehypothetical protein8e-1582.4
NC_007645:7136956:7186875718687571884071533Hahella chejuensis KCTC 2396, complete genomeTn7-like transposition protein D2e-1481.3
NC_015733:5955467:5966986596698659684641479Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-1377
NC_010634:4463727:4482542448254244839511410Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-1273.9
NC_010995:4525119:4545561454556145471231563Cellvibrio japonicus Ueda107, complete genomeTn7-Cj, transposition protein TnsD5e-1273.2
NC_010512:866932:8708458708458725541710Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein2e-1171.2
NC_010512:1015557:1043446104344610452211776Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein4e-1067
NC_002947:6152500:6166911616691161685091599Pseudomonas putida KT2440, complete genometransposition protein, TnsD-related protein1e-0965.5
NC_006512:2789098:2808892280889228104001509Idiomarina loihiensis L2TR, complete genomeTransposon Tn7 transposition protein tnsD1e-0965.5
NC_015572:4916430:4929675492967549311711497Methylomonas methanica MC09 chromosome, complete genometransposition protein2e-0964.7
NC_014394:1325616:1325616132561613273611746Gallionella capsiferriformans ES-2 chromosome, complete genomeTn5468, transposition protein D3e-0963.9
NC_009659:3815966:3831582383158238333721791Janthinobacterium sp. Marseille chromosome, complete genometransposition protein, TnsD-related protein3e-0860.5
NC_016616:1091606:1126937112693711284181482Dechlorosoma suillum PS chromosome, complete genomehypothetical protein4e-0860.1
NC_009052:5089963:5097427509742750989291503Shewanella baltica OS155, complete genometransposition protein1e-0758.9
NC_013959:1059004:1072504107250410740061503Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein6e-0756.2
NC_007384:4095016:4105292410529241068181527Shigella sonnei Ss046, complete genometransposition protein8e-0755.8
NC_017328:3935185:3952571395257139540971527Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsD8e-0755.8
NC_009838:81913:1135961135961151611566Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsD2e-0654.3
NC_014121:5000069:5011539501153950130951557Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsD2e-0654.3
NC_015740:4508375:4515166451516645166681503Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-0654.3
NC_015851:89006:1025961025961041221527Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein TnsD3e-0654.3
CU928145:3983432:399581639958163996613798Escherichia coli 55989 chromosome, complete genomehypothetical protein, Tn7-like transposition protein TnsD (fragment)4e-0653.5
NC_011748:3983432:399581639958163996613798Escherichia coli 55989, complete genomehypothetical protein, Tn7-like transposition protein TnsD (fragment)4e-0653.5
NC_010625:1602191:1619001161900116200171017Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein7e-0652.8