Pre_GI: BLASTP Hits

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Query: NC_007492:3180480:3186837 Pseudomonas fluorescens PfO-1, complete genome

Start: 3186837, End: 3187889, Length: 1053

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:4429435:4442768444276844438141047Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator2e-106385
NC_020829:4429435:4441701444170144427711071Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator3e-69262
NC_007492:3180480:318583231858323186830999Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family2e-56219
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein6e-36151
NC_015563:5289875:5289875528987552908821008Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator4e-34145
NC_015723:1047418:1058612105861210596371026Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator3e-28126
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-23110
NC_011894:2359128:2371528237152823726161089Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family1e-22107
NC_020064:521500:5491445491445502021059Serratia marcescens FGI94, complete genomeDNA-binding domain-containing protein, AraC-type1e-22107
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family4e-22105
NC_008314:1825223:1825223182522318262451023Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, AraC-family1e-21104
NC_015723:1448000:1459268145926814602901023Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator2e-21103
NC_007511:3371319:3372433337243333734791047Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-21101
NC_020829:1840281:1842091184209118431221032Pseudomonas denitrificans ATCC 13867, complete genomeputative regulator1e-20101
NC_010172:573046:5788135788135798771065Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type1e-20100
NC_015677:3787419:379209937920993793067969Ramlibacter tataouinensis TTB310 chromosome, complete genomeAraC family transcriptional regulator1e-20100
NC_010172:31264:5004950049511311083Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type8e-2098.2
NC_012560:2348202:2371675237167523727211047Azotobacter vinelandii DJ, complete genomeTranscription activator in PHB biosynthesis, AraC family3e-1996.3
NC_021150:2348214:2371687237168723727331047Azotobacter vinelandii CA6, complete genomeTranscription activator in PHB biosynthesis, AraC family3e-1996.3
NC_008027:2648560:2664870266487026658741005Pseudomonas entomophila L48, complete genomeDNA-binding protein, AraC family2e-1894
NC_002678:5060670:5060670506067050617341065Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-1893.6
NC_011894:2747491:2753607275360727547491143Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1893.2
NC_014364:3633291:364876036487603649443684Spirochaeta smaragdinae DSM 11293 chromosome, complete genome3e-1893.2
NC_013192:1504310:1504310150431015053831074Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, AraC family7e-1891.7
NC_015381:1705383:1712147171214717131481002Burkholderia gladioli BSR3 chromosome 1, complete sequenceTranscriptional regulator, AraC family protein2e-1790.1
NC_011001:163813:1853691853691864151047Burkholderia cenocepacia J2315 chromosome 2, complete sequenceAraC family regulatory protein3e-1789.7
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein3e-1789.7
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein8e-1788.2
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator9e-1788.2
NC_013222:1659619:168700316870031687992990Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein2e-1686.7
NC_014259:2948335:2949247294924729503171071Acinetobacter sp. DR1 chromosome, complete genomeAraC family transcriptional regulator3e-1686.3
NC_014762:2428721:2451614245161424526541041Sulfuricurvum kujiense DSM 16994 chromosome, complete genometranscriptional regulator, arac family3e-1686.3
NC_008740:2905990:2905990290599029070031014Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type5e-1685.5
NC_010506:5155951:5172420517242051735231104Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family8e-1684.7
NC_008061:2193000:2207475220747522085691095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1584.7
NC_011757:1288637:1298341129834112994411101Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-1583.6
NC_010172:31264:3612336123372231101Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type2e-1583.2
NC_009832:1280938:1293321129332112943581038Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family3e-1583.2
NC_012721:109500:1096671096671106921026Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein3e-1582.8
NC_012880:1585255:1593922159392215949351014Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family5e-1582
NC_013222:1659619:168204516820451683022978Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein6e-1582
NC_003911:1078949:110804211080421109040999Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family8e-1581.6
NC_008463:4342119:4364836436483643658371002Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator4e-1479.3
NC_014310:1822751:1837637183763718386561020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceAraC family transcriptional regulator5e-1479
NC_004578:5916711:594281359428135943805993Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, AraC family5e-1479
NC_011770:4542183:4564793456479345657941002Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator6e-1478.6
NC_020181:1653261:1656963165696316579701008Enterobacter aerogenes EA1509E, complete genomevirulence regulating protein6e-1478.6
NC_012660:3179980:3185843318584331868591017Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein7e-1478.2
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator8e-1478.2
NC_015663:3742738:3760268376026837612751008Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator8e-1478.2
NC_003296:673790:7245307245307255491020Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN9e-1478.2
NC_004129:4596040:4617563461756346185851023Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-1377.8
NC_013037:6344532:6368914636891463699511038Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family1e-1377.4
NC_015690:1967244:2015425201542520164621038Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-1377
NC_009439:101174:121557121557122549993Pseudomonas mendocina ymp, complete genomeAraC family transcriptional regulator8e-1375.1
NC_010162:8873051:888440788844078885000594Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator9e-1374.7
NC_010501:4989455:4998963499896350000001038Pseudomonas putida W619, complete genometranscriptional regulator, AraC family2e-1273.6
NC_002516:2306776:2306776230677623078101035Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-1273.6
NC_002516:891000:9057269057269067451020Pseudomonas aeruginosa PAO1, complete genometranscriptional regulator OruR3e-1273.2
NC_008463:4743296:4744858474485847458771020Pseudomonas aeruginosa UCBPP-PA14, complete genometranscriptional regulator OruR3e-1273.2
NC_011770:4924127:4961086496108649621051020Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator OruR3e-1273.2
NC_013592:1602242:1616182161618216171921011Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family3e-1273.2
NC_016609:3835656:384093838409383841936999Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator4e-1272.4
NC_010557:316000:3182723182723192881017Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family1e-1171.2
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator1e-1170.9
NC_015376:3320818:3331605333160533326571053Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AraC family protein2e-1170.5
NC_008390:2448379:2449503244950324505401038Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, AraC family2e-1170.1
NC_015136:1101725:1127466112746611284941029Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator3e-1169.7
NC_010506:3585533:3602734360273436038131080Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family5e-1168.9
NC_018691:2254566:2259228225922822602921065Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator7e-1168.6
NC_016830:3869572:3944718394471839457341017Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator1e-1067.4
NC_009075:92210:1022481022481032521005Burkholderia pseudomallei 668 chromosome II, complete sequenceputative transcriptional regulator2e-1067.4
NC_006351:73000:8293882938839571020Burkholderia pseudomallei K96243 chromosome 2, complete sequenceregulatory protein2e-1067
NC_010511:6067000:6076192607619260772861095Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator2e-1066.6
NC_010501:3671517:3693177369317736942051029Pseudomonas putida W619, complete genometranscriptional regulator, AraC family6e-1065.5
NC_010623:1961685:1995143199514319961891047Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-0964.3
NC_007651:3656433:3668226366822636692451020Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, putative1e-0964.3
NC_011894:2125474:213090421309042131221318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-0963.5
NC_009338:4869700:4887442488744248884821041Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein3e-0963.2
NC_011894:7702000:773128277312827731632351Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family3e-0962.8
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family1e-0860.8
NC_009952:2752500:2765180276518027662081029Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator3e-0859.7
NC_002516:2436304:244856824485682449545978Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator5e-0859.3
NC_011894:585637:613011613011613421411Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family5e-0858.9
NC_008702:3375027:3391123339112333922561134Azoarcus sp. BH72, complete genomeputative ornithine utilization regulator8e-0858.5
NC_008705:3430839:3436435343643534374391005Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type9e-0858.2
NC_009077:3376351:3381947338194733829511005Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type9e-0858.2
NC_008146:3401743:3408153340815334091571005Mycobacterium sp. MCS, complete genometranscriptional regulator, AraC family9e-0858.2
NC_016947:2380500:2392470239247023934741005Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAraC family transcriptional regulator9e-0858.2
NC_011894:2503639:251167325116732511990318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-0757.4
NC_009078:74954:823408234082975636Burkholderia pseudomallei 1106a chromosome II, complete sequenceregulatory protein2e-0757
NC_014323:992978:1005383100538310064171035Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein2e-0757
NC_013508:3593000:359718135971813597945765Edwardsiella tarda EIB202, complete genomeAraC-type DNA-binding domain-containing protein2e-0757
NC_012982:2730000:274518827451882746102915Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family3e-0756.6
NC_007650:84140:9053790537915531017Burkholderia thailandensis E264 chromosome II, complete sequencehypothetical protein3e-0756.6
NC_012779:3652737:366065036606503661414765Edwardsiella ictaluri 93-146, complete genomeporin thermoregulatory protein EnvY3e-0756.6
NC_012792:707864:7078647078647089371074Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, AraC family5e-0755.8
NC_007435:1914375:191647419164741917091618Burkholderia pseudomallei 1710b chromosome II, complete sequenceAraC family regulatory protein6e-0755.5
NC_010623:1961685:2021028202102820220441017Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-0755.5
NC_013446:2623528:2624404262440426254981095Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family6e-0755.5
NC_013510:4484000:4500552450055245016071056Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AraC family8e-0755.1
NC_016887:1714664:172429617242961725198903Nocardia cyriacigeorgica GUH-2, complete genometranscriptional regulator9e-0754.7
CU928160:3709081:372897137289713729795825Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-0654.3
AP010958:4313462:433219643321964333020825Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional dual regulator GadX1e-0654.3
NC_011748:3983432:403009440300944030918825Escherichia coli 55989, complete genomeDNA-binding transcriptional regulator GadX1e-0654.3
CU928145:3983432:403009440300944030918825Escherichia coli 55989 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-0654.3
NC_011741:3709081:372897137289713729795825Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator GadX1e-0654.3
NC_013353:4313462:433219643321964333020825Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional dual regulator GadX1e-0654.3
NC_013361:4566779:458575545857554586579825Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator GadX1e-0654.3
NC_004337:3590323:369729836972983698122825Shigella flexneri 2a str. 301, complete genomeputative ARAC-type regulatory protein1e-0654.3
NC_009075:92210:946159461595127513Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, AraC family1e-0654.3
NC_009800:3685651:370629737062973707121825Escherichia coli HS, complete genometranscriptional regulator GadX2e-0653.9
NC_000913:3624826:366300936630093663833825Escherichia coli K12, complete genomeDNA-binding transcriptional dual regulator2e-0653.9
NC_012759:3529657:355150335515033552327825Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator GadX2e-0653.9
NC_012967:3549880:359447735944773595301825Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator GadX2e-0653.9
NC_010067:3247169:326795232679523268713762Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0653.1
NC_006351:73000:752967529675802507Burkholderia pseudomallei K96243 chromosome 2, complete sequenceAraC family regulatory protein4e-0652.4