Pre_GI: BLASTP Hits

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Query: NC_007333:430000:442757 Thermobifida fusca YX, complete genome

Start: 442757, End: 443839, Length: 1083

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013131:6329438:6349938634993863513321395Catenulispora acidiphila DSM 44928, complete genomeAAA ATPase4e-67255
NC_003888:3602753:3610876361087636121711296Streptomyces coelicolor A3(2), complete genomeATP-binding protein6e-42171
NC_016609:6750111:6761634676163467629591326Niastella koreensis GR20-10 chromosome, complete genomeATPase2e-1687
NC_010556:316996:3392073392073405201314Exiguobacterium sibiricum 255-15, complete genomeAAA ATPase2e-1273.6
NC_007404:2743877:2759441275944127608771437Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein5e-1168.9
NC_003047:536151:5553595553595566901332Sinorhizobium meliloti 1021, complete genomehypothetical protein8e-1168.6
NC_011566:4709672:4712298471229847135991302Shewanella piezotolerans WP3, complete genomeATPase2e-1067
NC_015663:1356982:1367997136799713696401644Enterobacter aerogenes KCTC 2190 chromosome, complete genomeSMC domain-containing protein2e-1067
NC_014837:33014:4381943819454621644Pantoea sp. At-9b chromosome, complete genomeSMC domain-containing protein3e-1066.2
NC_008576:4701930:3859385952231365Magnetococcus sp. MC-1, complete genomeATP binding protein4e-1065.9
NC_015711:3122000:3126744312674431279821239Myxococcus fulvus HW-1 chromosome, complete genomeSMC domain-containing protein5e-1065.9
NC_014616:169311:1903041903041917101407Bifidobacterium bifidum S17 chromosome, complete genomeRecF/RecN/SMC N terminal domain5e-1065.9
NC_008570:2216736:2243181224318122448511671Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeRecF/RecN/SMC family protein6e-1065.5
NC_015381:1623587:1650399165039916517961398Burkholderia gladioli BSR3 chromosome 1, complete sequenceATP-binding protein1e-0964.7
NC_013410:3280039:3329681332968133309641284Fibrobacter succinogenes subsp. succinogenes S85 chromosome,SMC domain-containing protein4e-0962.8
NC_002505:2537655:2550614255061425522361623Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-0962.8
NC_012668:1036000:1042430104243010440521623Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP binding protein3e-0962.8
NC_016445:2012294:2020771202077120223931623Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-0962.8
NC_016944:2588435:2596912259691225985341623Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-0962.8
NC_006513:3486558:3507571350757135088691299Azoarcus sp. EbN1, complete genomehypothetical ATP-binding protein4e-0962.4
NC_015501:1200411:1218974121897412202331260Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein6e-0962
NC_008782:3167440:3196206319620631974261221Acidovorax sp. JS42, complete genomeSMC domain protein8e-0961.6
NC_009457:2095366:210485621048562105467612Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0861.6
NC_017068:2055500:2063556206355620648331278Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative ATP binding protein1e-0861.2
NC_006138:432000:4325504325504338331284Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0860.5
NC_015675:5607297:5623994562399456253641371Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAAA ATPase5e-0858.9
NC_016863:3905875:3911308391130839124981191Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ATP-binding protein7e-0858.5
NC_016860:3964000:3972905397290539740951191Salmonella enterica subsp. enterica serovar Typhimurium strATP-binding protein7e-0858.5
NC_013194:3861409:3880836388083638823051470Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeSMC domain protein1e-0757.4
NC_008752:3684739:3712155371215537134681314Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSMC domain protein1e-0654.3
NC_015675:5607297:5614345561434556156731329Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-binding protein involved in virulence2e-0653.9