Pre_GI: BLASTP Hits

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Query: NC_007333:3244572:3247145 Thermobifida fusca YX, complete genome

Start: 3247145, End: 3248302, Length: 1158

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:971592:989005989005989949945Acidobacterium capsulatum ATCC 51196, complete genomeputative 2-dehydro-3-deoxygluconokinase8e-1995.1
NC_014377:1871333:188402018840201884979960Thermosediminibacter oceani DSM 16646 chromosome, complete genomePfkB domain protein1e-1688.2
NC_016935:2302055:232117823211782322110933Paenibacillus mucilaginosus 3016 chromosome, complete genomePfkB domain-containing protein1e-1584.7
NC_016645:1909507:193030519303051931222918Pyrobaculum sp. 1860 chromosome, complete genomesugar kinase, possible phosphofructokinase1e-1584.3
NC_015690:1772015:1790953179095317919631011Paenibacillus mucilaginosus KNP414 chromosome, complete genomePfkB domain-containing protein2e-1583.6
NC_014205:760428:762045762045762983939Staphylothermus hellenicus DSM 12710 chromosome, complete genomePfkB domain protein2e-1273.9
NC_011899:1926000:194504219450421946004963Halothermothrix orenii H 168, complete genomeFructokinase2e-1273.6
NC_006270:3627974:365353536535353654500966Bacillus licheniformis ATCC 14580, complete genome2-keto-3-deoxygluconate kinase1e-1170.9
NC_014961:335808:347856347856348779924Desulfurococcus mucosus DSM 2162 chromosome, complete genome6-phosphofructokinase3e-1169.7
NC_016614:686887:703127703127704047921Vibrio sp. EJY3 chromosome 2, complete sequenceribokinase5e-1169.3
NC_015186:597695:618058618058618999942Acidiphilium multivorum AIU301, complete genomeputative carbohydrate kinase7e-1065.5
NC_009484:489398:509103509103510044942Acidiphilium cryptum JF-5 chromosome, complete genomeribokinase-like domain-containing protein7e-1065.5
NC_014219:999648:101778910177891018661873Bacillus selenitireducens MLS10 chromosome, complete genomeribokinase1e-0964.3
NC_021177:7159654:717986871798687180794927Streptomyces fulvissimus DSM 40593, complete genomeCarbohydrate kinase7e-0962
NC_015589:1468774:149295614929561493885930Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeribokinase1e-0861.6
NC_019897:2696587:271954227195422720498957Thermobacillus composti KWC4 chromosome, complete genomesugar kinase1e-0861.6
NC_015435:1713051:171942017194201720295876Metallosphaera cuprina Ar-4 chromosome, complete genomeribokinase1e-0861.2
NC_009515:1409912:140991214099121410826915Methanobrevibacter smithii ATCC 35061, complete genomeribokinase family sugar kinase1e-0860.8
NC_005823:2840000:284028928402892841275987Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130ribokinase2e-0860.5
NC_016516:463460:484287484287485276990Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecarbohydrate kinase2e-0860.5
NC_016511:472666:493491493491494480990Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecarbohydrate kinase2e-0860.5
NC_006085:481231:502057502057503046990Propionibacterium acnes KPA171202, complete genomecarbohydrate kinase2e-0860.5
NC_016048:2734563:275971227597122760680969Oscillibacter valericigenes Sjm18-20, complete genomeputative fructokinase5e-0858.9
NC_015161:1556766:156148615614861562424939Deinococcus proteolyticus MRP chromosome, complete genomeRibokinase9e-0858.5
NC_014039:499233:520054520054521043990Propionibacterium acnes SK137 chromosome, complete genomekinase, PfkB family1e-0758.2
NC_016023:1874827:190245519024551903378924Bacillus coagulans 36D1 chromosome, complete genomePfkB domain-containing protein1e-0758.2
NC_012968:507988:524163524163525119957Methylotenera mobilis JLW8, complete genomePfkB domain protein2e-0757.4
NC_019978:1816940:184300818430081843970963Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase2e-0757.4
NC_018665:2163713:218588721858872186765879Exiguobacterium antarcticum B7 chromosome, complete genomeRibokinase2e-0757.4
NC_016513:1761830:176742417674241768419996Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completemannonate dehydratase3e-0756.6
NC_010645:3239420:325865532586553259596942Bordetella avium 197N, complete genomeadenosine kinase3e-0756.6
NC_009778:3454790:346932234693223470245924Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0755.5
NC_014364:2863686:287834028783402879290951Spirochaeta smaragdinae DSM 11293 chromosome, complete genomePfkB domain protein8e-0755.5
NC_009654:4716417:472854147285414729503963Marinomonas sp. MWYL1, complete genomeribokinase-like domain-containing protein1e-0655.1
NC_016633:1898234:190183419018341902766933Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar kinase9e-0755.1
NC_006513:881120:881120881120882055936Azoarcus sp. EbN1, complete genomecarbohydrate kinase8e-0755.1
NC_015061:3840463:3864731386473138659451215Rahnella sp. Y9602 chromosome, complete genomeribokinase8e-0755.1
NC_017047:3907854:3932145393214539333591215Rahnella aquatilis HX2 chromosome, complete genomeribokinase8e-0755.1
NC_021064:1789980:179775317977531798679927Propionibacterium avidum 44067, complete genomeribokinase2e-0654.3
NC_020260:3457597:347212834721283473051924Cronobacter sakazakii Sp291, complete genomeaminoimidazole riboside kinase2e-0654.3
NC_015589:2447132:244713224471322448082951Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePfkB domain-containing protein2e-0653.9
NC_014618:1295322:130117213011721302068897Enterobacter cloacae SCF1 chromosome, complete genomePfkB domain-containing protein2e-0653.5
NC_003902:4111283:413348041334804134412933Xanthomonas campestris pv. campestris str. ATCC 33913, completesugar kinase2e-0653.5
NC_015389:114469:133030133030133995966Coriobacterium glomerans PW2 chromosome, complete genomePfkB domain protein4e-0652.8