Pre_GI: BLASTP Hits

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Query: NC_006905:4405301:4442217 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4442217, End: 4443908, Length: 1692

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:3310336:3312463331246333141541692Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0928
NC_011094:4361238:4398206439820643998521647Salmonella enterica subsp. enterica serovar Schwarzengrund strNa+/H+ antiporter0904
NC_007613:4119771:4136726413672641383751650Shigella boydii Sb227, complete genomehypothetical protein0869
NC_020181:3585898:3600246360024636018921647Enterobacter aerogenes EA1509E, complete genomePutative Na(+)/H(+) exchanger protein, CPA1 family precursor0838
NC_016612:1790256:1790256179025617918091554Klebsiella oxytoca KCTC 1686 chromosome, complete genomeNa+/H+ antiporter0785
NC_004547:843475:8566258566258582711647Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative sodium/hydrogen antiporter0708
NC_008702:369965:3699653699653716051641Azoarcus sp. BH72, complete genomeputative Na+/H+ antiporter8e-74278
NC_010995:1749054:1753438175343817550751638Cellvibrio japonicus Ueda107, complete genomeNa+/H+ antiporter5e-69262
NC_015634:2492771:2520388252038825224272040Bacillus coagulans 2-6 chromosome, complete genomeNa+/H+ antiporter1e-47191
NC_014169:2407266:2425094242509424271662073Bifidobacterium longum subsp. longum JDM301 chromosome, completesodium/hydrogen exchanger2e-33144
NC_014656:1704101:1704101170410117061732073Bifidobacterium longum subsp. longum BBMN68 chromosome, completenhap2e-33144
NC_006448:1451729:1456956145695614590222067Streptococcus thermophilus LMG 18311, complete genomeNa+:H+ antiporter4e-33143
NC_014371:1358615:2740274043231584Prevotella melaninogenica ATCC 25845 chromosome chromosome II,Na+/H+ antiporter2e-26121
NC_015291:665714:6837776837776858312055Streptococcus oralis Uo5, complete genomeNa+/H+ antiporter8e-26119
NC_013061:2775623:2775623277562327771971575Pedobacter heparinus DSM 2366, complete genomeNa+/H+ antiporter2e-25117
NC_014494:614809:6148096148096168632055Streptococcus pneumoniae AP200 chromosome, complete genomeNhaP-type Na+/H+ and K+/H+ antiporter7e-25115
NC_015312:5240653:5253897525389752554861590Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNa+/H+ antiporter5e-24113
NC_016605:272231:2932492932492952762028Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesodium/hydrogen exchanger family protein2e-1997.8
NC_014815:1490957:1516053151605315177651713Micromonospora sp. L5 chromosome, complete genomena+/h+ antiporter6e-1996.3
NC_014815:2363460:2388658238865823902381581Micromonospora sp. L5 chromosome, complete genomena+/h+ antiporter7e-1789.4
NC_016783:1169821:1189793118979311913671575Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative Na+/H+ antiporter2e-1584.3
NC_013530:3082587:3085151308515130869561806Xylanimonas cellulosilytica DSM 15894, complete genomesodium/hydrogen exchanger1e-1482
NC_019673:9084045:9095761909576190973021542Saccharothrix espanaensis DSM 44229 complete genomeCPA1 family transporter3e-1480.5
NC_010546:1911366:1925526192552619270941569Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceNa+/H+ antiporter1e-1379
NC_011184:325797:3473403473403485391200Vibrio fischeri MJ11 chromosome I, complete sequenceNhaP-type Na+/H+ and K+/H+ antiporter1e-1378.2
NC_016901:1527877:1534474153447415357781305Shewanella baltica OS678 chromosome, complete genomesodium/hydrogen exchanger2e-1274.7
NC_009665:1495473:1502903150290315042071305Shewanella baltica OS185 chromosome, complete genomesodium/hydrogen exchanger3e-1273.9
NC_009052:1394000:1400146140014614014501305Shewanella baltica OS155, complete genomesodium/hydrogen exchanger3e-1273.6
NC_011757:3540992:3540992354099235422541263Methylobacterium chloromethanicum CM4, complete genomesodium/hydrogen exchanger4e-1066.6
NC_010610:1178430:1227619122761912289771359Lactobacillus fermentum IFO 3956, complete genomeNa-H antiporter5e-1066.6
NC_012988:1777618:1808831180883118098801050Methylobacterium extorquens DM4, complete genomesodium/hydrogen exchanger1e-0965.1
NC_013210:57881:6150661506627681263Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017101:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017117:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017130:54759:6112661126623881263Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017134:54783:6115061150624121263Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017136:54751:6111861118623801263Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_017143:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-010, completeNa+/H+ antiporter NhaA/NhaP3e-0963.9
NC_016027:2446806:2460592246059224618541263Gluconacetobacter xylinus NBRC 3288, complete genomeNa+/H+ antiporter2e-0861.6
NC_012560:3282704:3287924328792432891951272Azotobacter vinelandii DJ, complete genomeNa+/H+ antiporter NhaP protein2e-0860.8
NC_021150:3282702:3287922328792232891931272Azotobacter vinelandii CA6, complete genomeNa+/H+ antiporter NhaP protein2e-0860.8
NC_012984:2681548:2688351268835126899521602Lactobacillus plantarum JDM1, complete genomeNa(+)/H(+) antiporter1e-0758.5
NC_011206:1873297:1880250188025018814431194Acidithiobacillus ferrooxidans ATCC 53993, complete genomesodium/hydrogen exchanger1e-0758.5
NC_015387:261799:2617992617992630371239Marinithermus hydrothermalis DSM 14884 chromosome, complete genomesodium/hydrogen exchanger4e-0757
NC_013851:2610847:2634772263477226360581287Allochromatium vinosum DSM 180 chromosome, complete genomesodium/hydrogen exchanger5e-0756.6
NC_015497:3497680:3515092351509235163751284Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomesodium/hydrogen exchanger1e-0655.5
NC_009952:2217877:2234212223421222367192508Dinoroseobacter shibae DFL 12, complete genomehypothetical protein1e-0655.1
NC_006677:1503513:1507798150779815089461149Gluconobacter oxydans 621H, complete genomeNa+/H+ Antiporter NhaA7e-0652.8