Pre_GI: BLASTP Hits

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Query: NC_006905:401154:402576 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 402576, End: 403214, Length: 639

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1360593:136395013639501364588639Salmonella enterica subsp. enterica serovar Paratyphi C strainPackaged DNA stabilization protein gp267e-118422
NC_011083:403022:404444404444405145702Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,head completion protein9e-80296
NC_010067:2529750:256914325691432569844702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-78291
NC_011205:645591:647013647013647714702Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gp262e-64244
NC_016860:397138:399020399020399721702Salmonella enterica subsp. enterica serovar Typhimurium strgp264e-61234
NC_007946:2593500:261094426109442611645702Escherichia coli UTI89, complete genomeDNA stabilization protein3e-59227
NC_008563:2565876:258417025841702584871702Escherichia coli APEC O1, complete genomeputative DNA stabilization protein3e-59227
NC_011742:2489000:250726725072672508070804Escherichia coli S88 chromosome, complete genomePackaged DNA stabilization protein from phage4e-59227
NC_013364:2612822:262794726279472628654708Escherichia coli O111:H- str. 11128, complete genomeputative head DNA stabilization protein7e-58223
NC_020418:3102460:311852731185273119270744Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-42172
NC_013361:3254000:327447232744723275320849Escherichia coli O26:H11 str. 11368 chromosome, complete genomehead DNA stabilization protein2e-32138
NC_011748:2655989:267912826791282679976849Escherichia coli 55989, complete genomePackaged DNA stabilization protein gp264e-32137
CU928145:2655989:267912826791282679976849Escherichia coli 55989 chromosome, complete genomePackaged DNA stabilization protein gp264e-32137
NC_017328:335160:336578336578337426849Shigella flexneri 2002017 chromosome, complete genomeputative Chromosome segregation ATPase6e-32137
NC_011740:2072173:208930020893002090148849Escherichia fergusonii ATCC 35469, complete genomePackaged DNA stabilization protein gp267e-32137
NC_016902:1475521:147693914769391477787849Escherichia coli KO11FL chromosome, complete genomeTropomyosin1e-31136
CP002185:2608000:262807026280702628918849Escherichia coli W, complete genomehypothetical protein1e-31136
CP002516:1475521:147693914769391477787849Escherichia coli KO11, complete genomeTropomyosin1e-31136
NC_009800:320115:320115320115321068954Escherichia coli HS, complete genomehypothetical protein6e-30130