Pre_GI: BLASTP Hits

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Query: NC_006624:2016000:2019123 Thermococcus kodakarensis KOD1, complete genome

Start: 2019123, End: 2019785, Length: 663

Host Lineage: Thermococcus kodakarensis; Thermococcus; Thermococcaceae; Thermococcales; Euryarchaeota; Archaea

General Information: This organism was originally identified as Pyrococcus sp. strain KOD1. It was isolated from a solfatara on Kodakara Island, Japan. Hyperthermophilic archeon. This genus is a member of the order Thermococcales in the Euryarchaeota. Thermococcus sp. are the most commonly isolated hyperthermophilic organisms and are often isolated from marine hydrothermal vents and terrestrial hot sulfur springs. Elemental sulfur is either required for, or stimulates, growth. These obligate heterotrophs can ferment a variety of organic compounds, including peptides, amino acids, and sugars in the absence of sulfur. Thermococcus kodakaraensis is a hyperthermophilic archeon. Proteins from this organism have been extensively studied to find thermostable enzymes for industrial and biotechnological applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014804:803510:808687808687809352666Thermococcus barophilus MP chromosome, complete genomeDNA repair and recombination RadB-like protein5e-86317
NC_012883:104987:110052110052110738687Thermococcus sibiricus MM 739, complete genomeDNA repair and recombination protein radB3e-82304
NC_015474:538544:569756569756570430675Pyrococcus sp. NA2 chromosome, complete genomeDNA repair and recombination protein RadB2e-80298
NC_002607:1221158:124090912409091241619711Halobacterium sp. NRC-1, complete genomeDNA repair and recombination protein RadB6e-32137
NC_010364:1215489:123014912301491230859711Halobacterium salinarum R1, complete genomeDNA repair protein6e-32137
NC_016070:1448488:1478312147831214794601149Thermoproteus tenax Kra 1, complete genomeDNA repair protein4e-23107
NC_005213:202400:375398375398376375978Nanoarchaeum equitans Kin4-M, complete genomeDNA repair and recombination protein RadA2e-22105
NC_005213:295994:375398375398376375978Nanoarchaeum equitans Kin4-M, complete genomeDNA repair and recombination protein RadA2e-22105
NC_011766:1106739:113669711366971137683987Desulfurococcus kamchatkensis 1221n chromosome, complete genomeDNA repair and recombination protein RadA4e-22104
NC_009635:985935:100392410039241004892969Methanococcus aeolicus Nankai-3 chromosome, complete genomeDNA repair and recombination protein RadA3e-1892
NC_007955:2122437:213869621386962139673978Methanococcoides burtonii DSM 6242, complete genomeDNA repair and recombination protein RadA2e-1582.4
NC_015315:795799:820570820570821511942Thermoproteus uzoniensis 768-20 chromosome, complete genomeFis family transcriptional regulator2e-1066.2
NC_010793:1075388:1080311108031110813811071Orientia tsutsugamushi str. Ikeda, complete genomeRecA protein3e-1065.5
NC_015151:953461:991323991323992309987Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeRad51 domain-containing protein2e-0962.4
NC_015978:113656:1158181158181169301113Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeprotein recA3e-0961.6
NC_008781:4178115:4220381422038142215351155Polaromonas naphthalenivorans CJ2, complete genomerecA protein8e-0960.5
NC_012438:132456:1425231425231435451023Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeprotein RecA8e-0960.5
NC_011297:1296968:1304122130412213054951374Dictyoglomus thermophilum H-6-12, complete genomeDNA repair protein RadA9e-0960.5
NC_016885:679890:681547681547682485939Pyrobaculum oguniense TE7 chromosome, complete genomerecombinase A1e-0757
NC_012115:1415827:1437592143759214388961305Nautilia profundicola AmH, complete genomeDNA repair protein RadA9e-0857
NC_014014:153837:159532159532160515984Mycoplasma crocodyli MP145 chromosome, complete genomeRecombinase protein RecA8e-0857
NC_015722:209722:2185062185062195641059Candidatus Midichloria mitochondrii IricVA chromosome, completerecombinase A1e-0756.6
NC_012673:1600242:1602157160215716035331377Exiguobacterium sp. AT1b, complete genomeDNA repair protein RadA1e-0756.2
NC_007799:284058:2912542912542926061353Ehrlichia chaffeensis str. Arkansas, complete genomeDNA repair protein RadA2e-0755.8
NC_012440:1874896:1880826188082618818421017Persephonella marina EX-H1, complete genomeprotein RecA2e-0755.8
NC_012440:373863:3825733825733839161344Persephonella marina EX-H1, complete genomeDNA repair protein RadA2e-0755.5
NC_000908:421467:4270904270904281121023Mycoplasma genitalium G37, complete genomerecombinase A5e-0754.7
NC_018497:421248:4268714268714278931023Mycoplasma genitalium M6320 chromosome, complete genomerecombinase A5e-0754.7
NC_006448:59654:6465464654658081155Streptococcus thermophilus LMG 18311, complete genomerecombinase A5e-0754.7
NC_006449:58436:6343763437645911155Streptococcus thermophilus CNRZ1066, complete genomerecombinase A5e-0754.7
NC_014166:2959688:2978880297888029799201041Arcobacter nitrofigilis DSM 7299 chromosome, complete genomerecombination protein RecA7e-0754.3
NC_008767:1363288:1378364137836413794101047Neisseria meningitidis FAM18, complete genomeRecA protein6e-0754.3
NC_011035:933269:9332699332699343151047Neisseria gonorrhoeae NCCP11945 chromosome, complete genomerecombinase A6e-0754.3
NC_009076:779407:7989687989688000381071Burkholderia pseudomallei 1106a chromosome I, complete sequencerecA protein6e-0754.3
NC_007434:1001514:1022326102232610233961071Burkholderia pseudomallei 1710b chromosome I, complete sequencerecombinase A6e-0754.3
NC_006350:845513:9033389033389044081071Burkholderia pseudomallei K96243 chromosome 1, complete sequencerecombinase A6e-0754.3
NC_015760:61345:6634866348674871140Streptococcus salivarius CCHSS3, complete genomerecombinase A6e-0754.3
NC_015381:3789661:3790785379078537918641080Burkholderia gladioli BSR3 chromosome 1, complete sequencerecombinase A9e-0753.9
NC_020541:2769419:2794047279404727950841038Rhodanobacter sp. 2APBS1, complete genomeprotein RecA9e-0753.9
NC_015733:1398083:1414688141468814157551068Pseudomonas putida S16 chromosome, complete genomerecombinase A9e-0753.9
NC_009073:696663:718226718226719164939Pyrobaculum calidifontis JCM 11548, complete genometranscriptional regulator, Fis family8e-0753.9
NC_014109:27500:498574985750855999Candidatus Riesia pediculicola USDA chromosome, complete genomeprotein RecA8e-0753.9
NC_014921:688978:7147787147787157971020Mycoplasma fermentans M64 chromosome, complete genomeprotein reca7e-0753.9
NC_009943:1499111:1514181151418115152571077Candidatus Desulfococcus oleovorans Hxd3, complete genomerecA protein7e-0753.9
NC_016818:749673:7677287677287687921065Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprotein RecA1e-0653.5
NC_012880:1127997:1138027113802711391181092Dickeya dadantii Ech703, complete genomerecA protein1e-0653.5
NC_009256:3056000:3056864305686430579341071Burkholderia vietnamiensis G4 chromosome 1, complete sequencerecombinase A1e-0653.5
NC_011000:1023800:1041169104116910422121044Burkholderia cenocepacia J2315 chromosome 1, complete sequencerecombinase A1e-0653.5
NC_013592:3618248:3625645362564536267271083Dickeya dadantii Ech586, complete genomerecA protein9e-0753.5
NC_009379:1910891:1913680191368019147711092Polynucleobacter sp. QLW-P1DMWA-1, complete genomerecA protein1e-0653.1
NC_008262:1835613:1837496183749618385541059Clostridium perfringens SM101, complete genomerecA protein1e-0653.1
NC_013421:1173051:1200637120063712017101074Pectobacterium wasabiae WPP163, complete genomerecA protein1e-0653.1
NC_011144:1073944:1092056109205610931411086Phenylobacterium zucineum HLK1, complete genomerecombinase A protein1e-0653.1
NC_008261:2157713:2163448216344821645061059Clostridium perfringens ATCC 13124, complete genomerecA protein1e-0653.1
NC_009952:1680682:1704693170469317057601068Dinoroseobacter shibae DFL 12, complete genomebacterial DNA recombination3e-0652.4
NC_004842:62000:6881068810698891080Anaplasma marginale str. St. Maries, complete genomerecombinase A3e-0652.4
NC_010804:2808676:2809533280953328105791047Burkholderia multivorans ATCC 17616 chromosome 1, completerecombination protein2e-0652.4
NC_010084:695817:7141677141677152401074Burkholderia multivorans ATCC 17616 chromosome 1, completerecombinase A2e-0652.4
NC_021177:7815791:7819114781911478202171104Streptomyces fulvissimus DSM 40593, complete genomeProtein RecA 22e-0652.4
NC_010995:2547164:2564442256444225655031062Cellvibrio japonicus Ueda107, complete genomerecA protein3e-0652
NC_009831:1539159:1544274154427415453351062Shewanella sediminis HAW-EB3, complete genomeCalcium-transporting ATPase3e-0652
NC_013192:1765981:1788637178863717897491113Leptotrichia buccalis DSM 1135, complete genomerecA protein4e-0651.6
NC_009439:442890:4490654490654501111047Pseudomonas mendocina ymp, complete genomerecA protein4e-0651.6
NC_018604:838932:8435638435638447531191Brachyspira pilosicoli WesB complete genomerecA protein4e-0651.6
NC_008593:196257:2075992075992089601362Clostridium novyi NT, complete genomeDNA repair protein RadA4e-0651.6
NC_020300:960692:9606929606929617351044Bartonella australis Aust/NH1, complete genomerecombinase A4e-0651.6
NC_010546:4786000:4791407479140747924561050Cyanothece sp. ATCC 51142 chromosome circular, complete sequencerecombination protein5e-0651.2
NC_008816:1476209:1501345150134515024421098Prochlorococcus marinus str. AS9601, complete genomeRecA bacterial DNA recombination protein5e-0651.2
NC_007577:1517000:1541645154164515427421098Prochlorococcus marinus str. MIT 9312, complete genomerecA protein5e-0651.2
NC_015873:1487127:1487127148712714885061380Megasphaera elsdenii DSM 20460, complete genomeDNA repair protein radA5e-0651.2
NC_010694:2971170:2974685297468529757521068Erwinia tasmaniensis, complete genomeRecombinase A8e-0650.8
NC_015499:119200:1609911609911620221032Thermodesulfobium narugense DSM 14796 chromosome, complete genomeProtein recA8e-0650.8
NC_013971:2876733:2880244288024428813111068Erwinia amylovora ATCC 49946 chromosome, complete genomerecombinase A6e-0650.8
NC_019903:421000:4310914310914324401350Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA repair protein RadA6e-0650.8
NC_004461:277291:2876832876832890561374Staphylococcus epidermidis ATCC 12228, complete genomeradA protein8e-0650.4
NC_005042:1552074:1567932156793215690711140Prochlorococcus marinus subsp. marinus str. CCMP1375, completerecombinase A8e-0650.4
NC_015687:3326461:3327546332754633288981353Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA repair protein RadA9e-0650.4
NC_003030:3324834:3325919332591933272711353Clostridium acetobutylicum ATCC 824, complete genomePredicted ATP-dependent serine protease, RADA homolog9e-0650.4
NC_010741:745357:7601777601777614001224Treponema pallidum subsp. pallidum SS14, complete genomeprotein RecA9e-0650.4
NC_000919:746875:7587297587297599521224Treponema pallidum subsp. pallidum str. Nichols, complete genomerecA protein (recA)9e-0650.4
NC_017268:747429:7599787599787612041227Treponema pallidum subsp. pallidum str. Chicago chromosome,protein RecA1e-0550.4