Pre_GI: BLASTP Hits

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Query: NC_006511:4465495:4472050 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 4472050, End: 4472348, Length: 299

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:1409596:142149714214971421796300Serratia marcescens FGI94, complete genomeTransposase3e-0857
NC_020064:3998715:406525240652524065551300Serratia marcescens FGI94, complete genomeTransposase3e-0857
NC_011294:346915:349125349125349433309Salmonella enterica subsp. enterica serovar Enteritidis strIS3 transposase2e-0754.3
NC_011205:371001:373211373211373510300Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853IS3 transposase OrfA2e-0754.3
NC_011205:1227373:123612212361221236421300Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853IS3 OrfA2e-0754.3
NC_011274:1129686:114949211494921149791300Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transposase2e-0754.3
NC_016831:1865681:187537318753731875672300Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transposase2e-0754.3
NC_011294:1085447:111278411127841113092309Salmonella enterica subsp. enterica serovar Enteritidis strtransposase4e-0753.5
NC_006511:2819128:285976228597622859980219Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-0753.5
NC_011147:2814664:285529828552982855516219Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-0753.5
NC_016832:2859491:287038228703822870600219Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase insE for insertion sequence IS3A4e-0753.5
NC_004631:2872192:288308328830832883297215Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-0753.5
NC_003198:2856596:289722628972262897440215Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0753.5
NC_012214:1650523:166992116699211670220300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, orf A7e-0752.8
NC_012214:1650523:165875516587551659054300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A7e-0752.8
NC_012214:1212616:122482812248281225127300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A7e-0752.8
NC_012214:2221702:226192422619242262223300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probale orf A6e-0752.8
NC_012214:1355500:136718113671811367480300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probable orf A6e-0752.8
NC_016863:2844883:287916928791692879468300Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase2e-0651.6
NC_016860:2917910:293424729342472934546300Salmonella enterica subsp. enterica serovar Typhimurium strIS3 transposase OrfA2e-0651.6
NC_016856:2896630:293091629309162931215300Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase2e-0651.6
NC_011083:2847318:288518728851872885486300Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IS3, transposase orfA2e-0651.6
NC_003197:2894344:291068129106812910980300Salmonella typhimurium LT2, complete genomeputative transposase2e-0651.6
NC_012214:1355500:137029913702991370598300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf B2e-0651.2
NC_011149:1110642:112229411222941122593300Salmonella enterica subsp. enterica serovar Agona str. SL483,IS3 OrfA2e-0651.2