Pre_GI: BLASTP Hits

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Query: NC_006511:3794017:3798794 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3798794, End: 3799129, Length: 336

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3789696:379447337944733794808336Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-59226
NC_016863:3967156:397193539719353972270336Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-58223
NC_016857:4025767:403195040319504032285336Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane lipoprotein2e-58223
NC_016856:4019549:402432840243284024663336Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-58223
NC_016810:4027170:403194940319494032284336Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein2e-58223
NC_003197:4005857:401063640106364010971336Salmonella typhimurium LT2, complete genomeputative outer membrane lipoprotein2e-58223
NC_010102:3955479:395952139595213959853333Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-58222
NC_011294:3880500:388529238852923885627336Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-58221
NC_004631:3809678:382324438232443823579336Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein8e-58221
NC_003198:3824187:383775438377543838089336Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein8e-58221
NC_011274:3799696:381327038132703813605336Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-57219
NC_015761:3698520:370164937016493702059411Salmonella bongori NCTC 12419, complete genomelipoprotein2e-54211
NC_010067:3753971:376765337676533767985333Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-53205
NC_016860:4110968:411579241157924116082291Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-49194
NC_011149:3930358:393517339351733935463291Salmonella enterica subsp. enterica serovar Agona str. SL483,conserved outer membrane protein1e-49194
NC_016832:3798475:381204138120413812331291Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-49192
NC_011205:4038884:404370640437064043996291Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-49192
NC_011094:3887648:389247138924713892761291Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-49192
NC_004337:3590323:388472038847203885127408Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-48189
NC_016831:3779611:379409237940923794382291Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative lipoprotein4e-48189
NC_017046:4025998:403085240308524031112261Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein9e-44175
NC_012125:3941974:394647239464723946732261Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-44175
NC_011080:3976441:398129439812943981554261Salmonella enterica subsp. enterica serovar Newport str. SL254,conserved outer membrane protein9e-44175
NC_011083:4020000:402491840249184025178261Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,conserved outer membrane protein9e-44175
NC_006905:3942753:395167839516783951938261Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein9e-44175