Pre_GI: BLASTP Hits

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Query: NC_006510:1014500:1034806 Geobacillus kaustophilus HTA426, complete genome

Start: 1034806, End: 1035216, Length: 411

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020210:901240:927891927891928301411Geobacillus sp. GHH01, complete genometranscriptional regulator BadM/Rrf2 family4e-71266
NC_007168:2349894:235174223517422352182441Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein9e-1372.4
NC_014376:6296:150851508515516432Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family2e-1270.9
NC_010516:359310:362087362087362518432Clostridium botulinum B1 str. Okra, complete genomerrf2 family protein4e-1270.1
NC_013893:2310495:231158523115852312010426Staphylococcus lugdunensis HKU09-01 chromosome, complete genomehypothetical protein6e-1269.3
NC_006582:3949832:395054039505403950968429Bacillus clausii KSM-K16, complete genomehypothetical protein2e-1167.8
NC_009952:2752500:275702127570212757491471Dinoroseobacter shibae DFL 12, complete genometranscriptional regulator2e-1167.8
NC_003212:456214:478256478256478723468Listeria innocua Clip11262, complete genomehypothetical protein4e-1167
NC_021182:1188000:119861611986161199044429Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator8e-1165.9
NC_006322:3198829:321768432176843218118435Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1063.5
NC_019842:484933:507481507481507924444Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein5e-1063.2
NC_014323:3976351:401382540138254014268444Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein7e-1062.8
NC_009725:496443:512050512050512493444Bacillus amyloliquefaciens FZB42, complete genomeYwnA19e-1062.4
NC_012984:3077004:309908130990813099506426Lactobacillus plantarum JDM1, complete genometranscription regulator (putative)1e-0961.6
NC_020410:495184:510885510885511328444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative HTH-type transcriptional regulator ywnA3e-0960.5
NC_012925:191501:192611192611193030420Streptococcus suis P1/7, complete genometranscriptional regulator protein6e-0959.3
NC_016582:11878078:119013021190130211901736435Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-0958.9
NC_013385:1882549:190942419094241909837414Ammonifex degensii KC4, complete genometranscriptional regulator, BadM/Rrf2 family1e-0858.5
NC_010520:3674883:369132836913283691729402Clostridium botulinum A3 str. Loch Maree, complete genomeputative transcriptional regulator2e-0858.2
NC_016012:805680:810599810599811045447Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeRRF2 family protein2e-0857.8
NC_012912:1053618:108756610875661088012447Dickeya zeae Ech1591, complete genometranscriptional regulator, BadM/Rrf2 family5e-0856.6
NC_012658:3678000:368338836833883683789402Clostridium botulinum Ba4 str. 657 chromosome, complete genomeRRF2 family protein5e-0856.6
NC_015968:2110175:211339521133952113874480Enterobacter asburiae LF7a chromosome, complete genomeBadM/Rrf2 family transcriptional regulator2e-0754.7
NC_009142:5579563:560469456046945605134441Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, BadM/Rrf2 family2e-0754.7
NC_013891:575746:587430587430587846417Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeRrf2 family transcriptional regulator protein2e-0754.3
NC_007645:2294553:233269523326952333102408Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator2e-0754.3
NC_015172:1255956:125705012570501257517468Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family3e-0753.9
NC_015663:3586836:359005335900533590532480Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator6e-0752.8
NC_021182:2422226:243676224367622437202441Clostridium pasteurianum BC1, complete genomerrf2 family protein, putative transcriptional regulator9e-0752.4
NC_017060:59500:641746417464659486Rahnella aquatilis HX2 plasmid PRA1, complete sequenceBadM/Rrf2 family transcriptional regulator1e-0652
NC_015062:58826:640356403564520486Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceBadM/Rrf2 family transcriptional regulator1e-0652
NC_013766:679906:679906679906680322417Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-0652
NC_007907:5104476:510869651086965109076381Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0650.8
NC_016514:1142607:114582911458291146347519Enterobacter cloacae EcWSU1 chromosome, complete genomeBadM/Rrf2 family transcriptional Regulator2e-0650.8
NC_012214:2019000:203727820372782037709432Erwinia pyrifoliae Ep1/96, complete genomeTranscription regulator, Rrf23e-0650.4
NC_011297:1357947:137869413786941379128435Dictyoglomus thermophilum H-6-12, complete genomeRRF2 protein family3e-0650.4