Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3586512 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3586512, End: 3587264, Length: 753

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014314:1485500:151318815131881513871684Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein1e-24113
NC_015587:90539:102335102335103021687Hydrogenobaculum sp. SHO chromosome, complete genomeprotein of unknown function DUF453e-23108
NC_020411:90538:102334102334103020687Hydrogenobaculum sp. HO, complete genomeputative metal-dependent hydrolase3e-23108
NC_015557:90503:102299102299102985687Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein of unknown function DUF453e-23108
NC_010364:84900:960629606296787726Halobacterium salinarum R1, complete genomehypothetical protein7e-22104
NC_002607:81452:936349363494359726Halobacterium sp. NRC-1, complete genomehypothetical protein7e-22104
NC_018876:587094:614894614894615613720Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein4e-2098.2
NC_004463:5540924:555390755539075554608702Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-1997.1
NC_009922:2323083:233260823326082333318711Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF451e-1996.7
NC_010003:1126800:113860011386001139271672Petrotoga mobilis SJ95, complete genomeprotein of unknown function DUF451e-1996.7
NC_010505:3690000:371095337109533711687735Methylobacterium radiotolerans JCM 2831, complete genomeprotein of unknown function DUF454e-1995.1
NC_012808:420334:442504442504443229726Methylobacterium extorquens AM1, complete genomeputative metal-dependent hydrolase5e-1994.7
NC_011757:577611:600296600296601021726Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF455e-1994.7
NC_010172:632180:654858654858655640783Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF455e-1994.7
NC_017095:166896:172440172440173216777Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative metal-dependent hydrolase9e-1994
NC_010725:594500:616747616747617472726Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF458e-1994
NC_012881:1802000:181666418166641817356693Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF451e-1893.6
NC_014209:1363151:138894013889401389614675Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function DUF451e-1893.2
NC_007298:3764048:378960337896033790322720Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF452e-1892.8
NC_013440:3813132:383641238364123837140729Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF452e-1892.8
NC_008601:753221:756324756324756983660Francisella tularensis subsp. novicida U112, complete genomepredicted metal-dependent hydrolase5e-1891.7
NC_007614:620500:632096632096632752657Nitrosospira multiformis ATCC 25196 chromosome 1, completeProtein of unknown function DUF455e-1891.3
NC_013799:1:122641226412929666Hydrogenobacter thermophilus TK-6, complete genomeputative metal-dependent hydrolase1e-1790.1
NC_017161:1:123251232512990666Hydrogenobacter thermophilus TK-6 chromosome, complete genomehypothetical protein1e-1790.1
NC_016616:1233555:125591812559181256694777Dechlorosoma suillum PS chromosome, complete genomeputative metal-dependent hydrolase1e-1790.1
NC_008577:4533574:455257045525704553277708Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF451e-1789.7
NC_015161:1556766:158660715866071587332726Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein2e-1686.3
NC_009439:608500:620768620768621475708Pseudomonas mendocina ymp, complete genomehypothetical protein2e-1686.3
NC_008313:1:140531405314766714Ralstonia eutropha H16 chromosome 1, complete sequencepredicted metal-dependent hydrolase2e-1685.9
NC_003366:981105:985384985384985761378Clostridium perfringens str. 13, complete genomehypothetical protein4e-1685.5
NC_014414:1104386:111338811133881114113726Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein4e-1685.1
NC_011365:1969198:199482019948201995542723Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein1e-1583.6
NC_016002:1048420:107075310707531071505753Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein3e-1582.4
NC_004663:4373902:437876143787614379459699Bacteroides thetaiotaomicron VPI-5482, complete genomeputative zinc protease3e-1582.4
NC_008346:2579756:259647425964742597157684Syntrophomonas wolfei subsp. wolfei str. Goettingen, completezinc metalloprotease6e-1581.3
NC_021184:3259908:327702332770233277727705Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase1e-1480.5
NC_011726:3051408:305606430560643056747684Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF452e-1479.3
NC_016047:2480921:248716224871622487836675Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completezinc metalloprotease6e-1477.8
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF458e-1477.4
NC_008751:2060391:207008320700832070781699Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF452e-1376.6
NC_009076:75535:959769597696527552Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-1375.9
NC_015684:362236:394202394202394957756Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein2e-1375.9
NC_004369:256262:284851284851285555705Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-1375.5
NC_002937:1374532:138686213868621387560699Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein3e-1375.5
NC_015865:229883:235819235819236481663Thermococcus sp. 4557 chromosome, complete genomezinc-dependent protease4e-1375.1
NC_002937:1764117:177699817769981777741744Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein7e-1374.3
NC_016051:1005188:101802710180271018689663Thermococcus sp. AM4 chromosome, complete genomehypothetical protein1e-1273.9
NC_009524:1369395:136863413686341369398765Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein2e-1272.8
NC_016147:2266419:227062322706232271036414Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemetal-dependent hydrolase3e-1272.4
NC_006672:47610:623616236163098738Gluconobacter oxydans 621H plasmid pGOX1, complete sequencehypothetical protein4e-1271.6
NC_016620:781995:800209800209800919711Bacteriovorax marinus SJ, complete genomehypothetical protein5e-1271.6
NC_006270:4149004:416263541626354163360726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-1271.6
NC_006322:4149500:416275041627504163475726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-1271.6
NC_007575:973559:991742991742992401660Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein7e-1271.2
NC_014217:2760898:276659827665982767314717Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF458e-1270.9
NC_012108:2194251:219857721985772199272696Desulfobacterium autotrophicum HRM2, complete genomemetal-dependent hydrolase family protein8e-1270.9
NC_021064:793098:808571808571809317747Propionibacterium avidum 44067, complete genomehypothetical protein2e-1169.3
NC_013592:446092:460082460082460804723Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF452e-1169.3
NC_016023:1923170:193655119365511937273723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein3e-1168.9
NC_016023:267581:284280284280285002723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein4e-1168.6
NC_015953:2349503:237063823706382371444807Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein4e-1168.6
NC_007356:51080:963479634797090744Dehalococcoides sp. CBDB1, complete genomeputative zinc protease5e-1168.2
NC_018876:2151226:215688321568832157608726Methanolobus psychrophilus R15 chromosome, complete genomeprotein of unknown function DUF456e-1168.2
NC_010994:859500:878308878308879012705Rhizobium etli CIAT 652, complete genomehypothetical protein8e-1167.4
NC_003902:3430051:345001834500183450764747Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein8e-1167.4
NC_007086:1457531:146002814600281460774747Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein8e-1167.4
NC_007681:1455425:147123014712301471799570Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein1e-1067
NC_009033:755226:765445765445766002558Staphylothermus marinus F1, complete genomeprotein of unknown function DUF451e-1067
NC_016642:757964:761247761247761987741Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein1e-1066.6
NC_018604:2579000:261007926100792610777699Brachyspira pilosicoli WesB complete genomeputative metal-dependent hydrolase2e-1066.6
NC_015320:1690047:169190316919031692589687Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein3e-1065.9
NC_010688:1435694:143817014381701438916747Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-1065.9
NC_009943:272158:273252273252274013762Candidatus Desulfococcus oleovorans Hxd3, complete genomeprotein of unknown function DUF454e-1065.5
NC_016803:2431672:244331024433102444038729Desulfovibrio desulfuricans ND132 chromosome, complete genomehypothetical protein6e-1064.7
NC_016616:1534983:155064015506401551002363Dechlorosoma suillum PS chromosome, complete genomeputative metal-dependent hydrolase6e-1064.7
NC_012778:1573847:1583235158323515857902556Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0963.5
NC_011761:684969:689122689122689856735Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-0963.2
NC_011206:863987:868140868140868874735Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF452e-0963.2
NC_009665:2602000:262300026230002623743744Shewanella baltica OS185 chromosome, complete genomehypothetical protein2e-0962.8
NC_007164:1434305:146910814691081469854747Corynebacterium jeikeium K411, complete genomehypothetical protein5e-0961.6
NC_021184:207492:211795211795212508714Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase5e-0961.6
NC_011831:2213306:221691022169102217245336Chloroflexus aggregans DSM 9485, complete genomeprotein of unknown function DUF454e-0961.6
NC_009633:4097536:413918741391874139939753Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein7e-0960.8
NC_003901:2727361:273144327314432732159717Methanosarcina mazei Go1, complete genomeZinc metalloprotease8e-0960.8
NC_011901:1860887:188593218859321886648717Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completezinc metalloprotease2e-0859.7
NC_008025:2211813:222344422234442223758315Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF452e-0859.7
NC_015581:680460:683559683559684281723Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein2e-0859.3
NC_010581:2999002:304575830457583046489732Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein of unknown function DUF453e-0859.3
NC_013173:953633:957260957260957982723Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF454e-0858.5
NC_015635:4864349:487639248763924877132741Microlunatus phosphovorus NM-1, complete genomehypothetical protein4e-0858.5
NC_013929:3299736:333195433319543332676723Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-0858.5
NC_017187:814940:832640832640833353714Arcobacter butzleri ED-1, complete genomehypothetical protein6e-0858.2
NC_013209:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein8e-0857.8
NC_017100:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein8e-0857.8
NC_017108:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein8e-0857.8
NC_017111:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein8e-0857.8
NC_017121:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein8e-0857.8
NC_017125:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein8e-0857.8
NC_017146:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein8e-0857.8
NC_017150:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein8e-0857.8
NC_018720:47984:669716697167579609Bifidobacterium asteroides PRL2011 chromosome, complete genomeputative metal-dependent hydrolase1e-0757
NC_019977:1353332:136725713672571367973717Methanomethylovorans hollandica DSM 15978, complete genomeputative metal-dependent hydrolase2e-0756.6
NC_016590:1380092:139055813905581391286729Burkholderia sp. YI23 chromosome 3, complete sequencezinc metalloprotease2e-0756.6
NC_014550:2562053:258681325868132587532720Arthrobacter arilaitensis Re117, complete genomehypothetical protein2e-0756.6
NC_013895:1332832:133759613375961338426831Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein2e-0756.2
NC_013720:1382561:140264214026421403358717Pirellula staleyi DSM 6068, complete genomeprotein of unknown function DUF452e-0755.8
NC_013093:1036772:104033510403351040862528Actinosynnema mirum DSM 43827, complete genomeprotein of unknown function DUF454e-0755.1
NC_017271:1289278:130217413021741302878705Xanthomonas campestris pv. raphani 756C chromosome, completezinc metalloprotease5e-0755.1
NC_015942:2213710:223315222331522233892741Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein6e-0754.7
NC_012440:1215838:122285112228511223561711Persephonella marina EX-H1, complete genomezinc metalloprotease1e-0653.9
NC_012917:985617:100025410002541000970717Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-0652.8
NC_014814:3892000:390388139038813904606726Mycobacterium sp. Spyr1 chromosome, complete genomemetal-dependent hydrolase2e-0652.8
NC_011283:5011497:501393050139305014646717Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0652.8
NC_011601:1114104:115026811502681150984717Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-0652
NC_007644:1694879:170403517040351704448414Moorella thermoacetica ATCC 39073, complete genomemetal-dependent hydrolase-like4e-0652
NC_019902:1863162:186452418645241865234711Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative metal-dependent hydrolase6e-0651.6
NC_008611:3579500:358971435897143590352639Mycobacterium ulcerans Agy99, complete genomezinc metalloprotease7e-0651.2
NC_014934:3786132:379476837947683795481714Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein8e-0650.8