Pre_GI: BLASTP Hits

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Query: NC_005363:2172444:2184167 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2184167, End: 2184772, Length: 606

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:2691437:271165027116502712309660Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HAD-superfamily hydrolase5e-1477.8
NC_005296:4574213:457894045789404579608669Rhodopseudomonas palustris CGA009, complete genomeHaloacid dehalogenase-like hydrolase2e-1375.5
NC_013132:782846:786635786635787249615Chitinophaga pinensis DSM 2588, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-1374.7
NC_013282:4312791:433241243324124333011600Cronobacter turicensis, complete genomePhosphatase yihX1e-1272.8
NC_010067:3538169:356629935662993566898600Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1169.3
NC_011080:4177443:419707741970774197676600Salmonella enterica subsp. enterica serovar Newport str. SL254,phosphatase YihX2e-1169.3
NC_004088:4202247:422097542209754221565591Yersinia pestis KIM, complete genomephosphatase1e-1066.6
NC_017265:4065625:408435340843534084943591Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,phosphatase1e-1066.6
NC_013892:202778:224222224222224881660Xenorhabdus bovienii SS-2004 chromosome, complete genomephosphatase-like domain-containing protein1e-1066.6
NC_019904:3127945:313029731302973130929633Echinicola vietnamensis DSM 17526 chromosome, complete genomehaloacid dehalogenase superfamily protein1e-1066.6
NC_016609:7565483:758021775802177580828612Niastella koreensis GR20-10 chromosome, complete genomeHAD-superfamily hydrolase1e-1066.2
NC_010644:485966:499364499364499972609Elusimicrobium minutum Pei191, complete genomeHAD family hydrolase2e-1065.9
NC_008800:36500:406484064841235588Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phosphatase4e-1064.7
NC_014825:165701:171869171869172483615Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceHAD-superfamily hydrolase, subfamily IA, variant 32e-0859.3
NC_018644:637497:642187642187642789603Alpha proteobacterium HIMB59 chromosome, complete genomehaloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED8e-0857
NC_017295:3762622:377955437795543780159606Clostridium acetobutylicum EA 2018 chromosome, complete genomeHAD superfamily hydrolase2e-0755.8
NC_015687:3766000:378178537817853782390606Clostridium acetobutylicum DSM 1731 chromosome, complete genomeHAD family phosphatase2e-0755.8
NC_003030:3763054:378020237802023780807606Clostridium acetobutylicum ATCC 824, complete genomeHAD superfamily hydrolase2e-0755.8
NC_016109:3875617:387905938790593879682624Kitasatospora setae KM-6054, complete genomeputative hydrolase7e-0753.9
NC_018750:6132619:614899861489986149627630Streptomyces venezuelae ATCC 10712, complete genomeHAD-superfamily hydrolase subfamily IA, variant 31e-0653.1
NC_000853:648075:674278674278674883606Thermotoga maritima MSB8, complete genomehypothetical protein1e-0653.1
NC_015576:3976679:400094240009424001580639Mycobacterium sp. JDM601 chromosome, complete genomeHAD family hydrolase1e-0652.8
NC_017325:967598:980223980223980858636Sinorhizobium meliloti SM11 chromosome, complete genomeHAD family hydrolase1e-0652.8
NC_017322:2191391:219941921994192200054636Sinorhizobium meliloti BL225C chromosome, complete genomeHAD-superfamily hydrolase1e-0652.8
NC_015590:2290359:229838722983872299022636Sinorhizobium meliloti AK83 chromosome 1, complete sequenceHAD superfamily hydrolase1e-0652.8
NC_003047:2477810:248583824858382486473636Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-0652.8
NC_015578:2341026:234102623410262341655630Treponema primitia ZAS-2 chromosome, complete genomeHAD superfamily hydrolase6e-0650.8