Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4391036 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4391036, End: 4392484, Length: 1449

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009328:3322802:3349832334983233512441413Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeaminobenzoyl-glutamate utilization protein B3e-149528
NC_020210:3341976:3377439337743933788421404Geobacillus sp. GHH01, complete genomeaminobenzoyl-glutamate utilization protein B2e-146519
NC_007509:3668:5860586072781419Burkholderia sp. 383 chromosome 3, complete sequencePeptidase M20D, amidohydrolase4e-133474
NC_007509:1383013:5860586072781419Burkholderia sp. 383 chromosome 3, complete sequencePeptidase M20D, amidohydrolase4e-133474
NC_015563:4414854:4436842443684244382691428Delftia sp. Cs1-4 chromosome, complete genomeamidohydrolase1e-121436
NC_015578:3011133:3029211302921130306471437Treponema primitia ZAS-2 chromosome, complete genomeaminobenzoyl-glutamate utilization protein B8e-121434
NC_015726:1813961:1824872182487218263021431Cupriavidus necator N-1 chromosome 1, complete sequenceaminobenzoyl-glutamate utilization protein B2e-117423
NC_015726:1813961:1823379182337918248751497Cupriavidus necator N-1 chromosome 1, complete sequenceaminobenzoyl-glutamate utilization protein B7e-116417
NC_019973:5716453:5728979572897957304241446Mesorhizobium australicum WSM2073, complete genomeamidohydrolase8e-114410
NC_015675:6342164:6354690635469063561351446Mesorhizobium opportunistum WSM2075 chromosome, complete genomeamidohydrolase8e-114410
NC_014923:5787493:5800019580001958014641446Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeamidohydrolase8e-114410
NC_015726:1813961:1828464182846418298881425Cupriavidus necator N-1 chromosome 1, complete sequenceaminobenzoyl-glutamate utilization protein B2e-112405
NC_018531:2085939:2105492210549221069791488Arthrobacter sp. Rue61a chromosome, complete genomeaminobenzoyl-glutamate utilization proteinB5e-99362
NC_015136:2282488:2301323230132323027441422Burkholderia sp. CCGE1001 chromosome 1, complete sequenceamidohydrolase1e-95350
NC_013850:2182337:2242620224262022442031584Klebsiella variicola At-22 chromosome, complete genomeamidohydrolase6e-55215
NC_015703:4531578:4533486453348645351621677Runella slithyformis DSM 19594 chromosome, complete genomepeptidase dimerization domain-containing protein2e-50200
NC_004557:2607073:2616689261668926178641176Clostridium tetani E88, complete genomeamidohydrolase8e-48191
NC_014318:7821227:7822402782240278237241323Amycolatopsis mediterranei U32 chromosome, complete genomeAma/HipO/HyuC family hydrolase4e-39162
NC_017186:7822448:7822448782244878237701323Amycolatopsis mediterranei S699 chromosome, complete genomeAma/HipO/HyuC family hydrolase4e-39162
NC_004193:375416:5983345983345994971164Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-36153
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome1e-33144
NC_018704:2417902:2434082243408224352901209Amphibacillus xylanus NBRC 15112, complete genomepeptidase M20 family protein2e-33144
NC_014314:576465:6054636054636066531191Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeamidohydrolase2e-32140
NC_016641:2773757:2796677279667727978971221Paenibacillus terrae HPL-003 chromosome, complete genomeamidohydrolase2e-32140
NC_010718:2860096:2875975287597528771531179Natranaerobius thermophilus JW/NM-WN-LF, complete genomeamidohydrolase1e-26121
NC_009342:841500:8525518525518536901140Corynebacterium glutamicum R chromosome, complete genomehypothetical protein7e-24112
NC_008262:2649289:2665378266537826665471170Clostridium perfringens SM101, complete genomeamidohydrolase-like protein2e-1687.4
NC_010674:192951:2077502077502089101161Clostridium botulinum B str. Eklund 17B, complete genomeamidohydrolase8e-1685.5
NC_008261:3014373:3023563302356330247321170Clostridium perfringens ATCC 13124, complete genomeamidohydrolase-like protein1e-1585.1
NC_010723:173280:2095672095672107271161Clostridium botulinum E3 str. Alaska E43, complete genomeamidohydrolase1e-1584.7
NC_003366:2788268:2800923280092328020921170Clostridium perfringens str. 13, complete genomehypothetical protein2e-1584.3
NC_015425:2690448:2690448269044826915991152Clostridium botulinum BKT015925 chromosome, complete genomeputative amidohydrolase2e-1584
NC_014011:1760793:1789884178988417911941311Aminobacterium colombiense DSM 12261 chromosome, complete genomeamidohydrolase2e-1377.4
NC_020210:3341976:3376166337616633774251260Geobacillus sp. GHH01, complete genomeindole-3-acetyl-aspartic acid hydrolase1e-1068.2
NC_009328:3322802:3348561334856133498261266Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeindole-3-acetyl-L-aspartic acid hydrolase1e-0758.2
NC_014166:1179335:1183664118366411848181155Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeamidohydrolase7e-0755.8
NC_007645:6407370:6426861642686164281621302Hahella chejuensis KCTC 2396, complete genomeMetal-dependent amidase/aminoacylase/carboxypeptidase3e-0653.9