Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3501468 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3501468, End: 3501872, Length: 405

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1827000:182919018291901829786597Photorhabdus asymbiotica, complete genometwin-arginine leader-binding protein dmsd4e-51199
NC_011147:4297513:430330043033004304004705Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-25113
NC_004631:4381724:438546243854624386148687Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-25113
NC_003198:4397074:440081244008124401498687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-25113
NC_016832:4368948:437277943727794373372594Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxidoreductase component6e-25112
NC_003197:4551880:455573145557314556384654Salmonella typhimurium LT2, complete genomeputative anaerobic dehydrogenase component2e-24111
NC_016810:4573172:457702345770234577676654Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-24111
NC_016856:4563435:456927345692734569926654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative anaerobic dehydrogenase component2e-24111
NC_016857:4573173:457702445770244577677654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative anaerobic dehydrogenase component2e-24111
NC_016863:4513106:451687945168794517532654Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative anaerobic dehydrogenase component2e-24111
NC_011294:4409137:441298744129874413640654Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-24111
NC_016831:4367000:437110143711014371694594Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-24110
NC_011094:4442478:444632944463294446982654Salmonella enterica subsp. enterica serovar Schwarzengrund stroxidoreductase3e-24110
NC_011149:4474012:447792344779234478516594Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-24110
NC_011080:4543000:454691045469104547503594Salmonella enterica subsp. enterica serovar Newport str. SL254,oxidoreductase component3e-24110
NC_012125:4481808:448571944857194486312594Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-24110
NC_010102:4477836:448174744817474482340594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-24110
NC_016860:4649274:465318546531854653778594Salmonella enterica subsp. enterica serovar Typhimurium strputative anaerobic dehydrogenase component2e-24110
NC_017046:4571833:457574445757444576337594Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-24110
NC_011083:4547825:455173645517364552329594Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-24110
NC_011274:4385039:439089543908954391548654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-24110
NC_011205:4564645:457054345705434571136594Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-24110
NC_006905:4486433:449028444902844490937654Salmonella enterica subsp. enterica serovar Choleraesuis strputative component of anaerobic dehydrogenase2e-24110
NC_017047:1551836:155276315527631553371609Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein4e-1579.7
NC_015061:1598920:159984715998471600455609Rahnella sp. Y9602 chromosome, complete genomecytoplasmic chaperone TorD family protein4e-1579.7
NC_016818:1605918:160684516068451607453609Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative component of anaerobic dehydrogenase3e-1373.6
NC_016513:810259:811531811531812145615Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetwin-arginine leader-binding protein DmsD8e-1372.4
NC_009053:1895485:190402719040271904632606Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein7e-1269.3
NC_010939:1920781:192932819293281929933606Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-1167.8
NC_009831:1539159:155485015548501555464615Shewanella sediminis HAW-EB3, complete genomecytoplasmic chaperone TorD family protein1e-0962
NC_016901:2594942:260227826022782602943666Shewanella baltica OS678 chromosome, complete genomeTorD-like chaperone4e-0960.1
NC_009997:2635025:264236126423612643026666Shewanella baltica OS195, complete genomecytoplasmic chaperone TorD family protein4e-0960.1
NC_004347:4541742:455705445570544557683630Shewanella oneidensis MR-1, complete genomehypothetical protein3e-0753.9