Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3495800 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3495800, End: 3496402, Length: 603

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1827000:183477418347741835376603Photorhabdus asymbiotica, complete genomesynthesis of vitamin b12 adenosyl cobalamide1e-97355
NC_013892:853366:864258864258864878621Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase) (Cobalt-precorrin-6Y methylase)1e-54212
NC_011094:2061000:208861420886142089219606Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-6Y C(5)-methyltransferase2e-49194
NC_011149:2040396:206692620669262067531606Salmonella enterica subsp. enterica serovar Agona str. SL483,precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit3e-49194
NC_009089:3998347:401890940189094019517609Clostridium difficile 630, complete genomeprobable cobalt-precorrin-6y C(5)-methyltransferase3e-49194
NC_013316:3863728:388431338843133884921609Clostridium difficile R20291, complete genomeputative cobalt-precorrin-6y C(5)-methyltransferase3e-49194
NC_009633:74500:927539275393373621Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase subunit CbiE1e-27122
NC_013517:1055854:109592510959251096548624Sebaldella termitidis ATCC 33386, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit2e-26119
NC_014633:442755:469171469171469800630Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-6Y C5,15-methyltransferase6e-26117
NC_015519:488550:489620489620490261642Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE7e-25113
NC_004557:749330:7605677605677617811215Clostridium tetani E88, complete genomeprecorrin-6B methylase/decarboxylase cbiT/cbiE1e-23109
NC_021182:1245692:125783312578331258570738Clostridium pasteurianum BC1, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit5e-23107
NC_003366:1427785:142778514277851428396612Clostridium perfringens str. 13, complete genomeprecorrin-6Y methylase2e-22105
NC_012491:1263469:1276131127613112773601230Brevibacillus brevis NBRC 100599, complete genomeCbiET protein1e-21103
NC_014734:3086165:309627730962773096936660Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-6y c5,15-methyltransferase (decarboxylating), cbie subunit7e-22103
NC_014328:3482980:349087734908773491494618Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase1e-1996.7
NC_017068:1788235:181783618178361818507672Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative cobalt-precorrin-6Y C(5)-methyltransferase1e-1996.3
NC_019903:1058657:1063940106394010651721233Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,precorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT1e-1996.3
NC_021171:415771:4244844244844256891206Bacillus sp. 1NLA3E, complete genomeCbiET protein5e-1994.4
NC_009253:2927802:293950329395032940129627Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE2e-1892.4
NC_011059:1391734:1407598140759814088001203Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit9e-1890.1
NC_014622:5315500:5325758532575853270141257Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase3e-1788.2
NC_016641:1085862:1094656109465610959121257Paenibacillus terrae HPL-003 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase4e-1787.8
NC_014483:4957315:4967470496747049687261257Paenibacillus polymyxa E681 chromosome, complete genomeProbable cobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase)6e-1787.4
NC_015636:1061736:108212510821251082742618Methanothermococcus okinawensis IH1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE9e-1683.2
NC_010001:1702350:1719119171911917210861968Clostridium phytofermentans ISDg, complete genomeprecorrin-6x reductase1e-1582.8
NC_008593:2250871:225965922596592260279621Clostridium novyi NT, complete genomeprecorrin-6B methylase/decarboxylase cbiT/cbiE4e-1581.3
NC_015565:624298:634393634393635019627Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprecorrin-6y C5,15-methyltransferase , CbiE subunit1e-1480.1
NC_008148:672608:6765866765866777971212Rubrobacter xylanophilus DSM 9941, complete genomePrecorrin-6y C5,15-methyltransferase, subunit CbiE9e-1580.1
NC_015690:7518732:7518732751873275200091278Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCbiET protein2e-1478.6
NC_006138:225832:2370572370572382651209Desulfotalea psychrophila LSv54, complete genomeprecorrin-6Y C5,15-methyltransferase (CobL)1e-1376.3
NC_021177:4258102:4258731425873142600351305Streptomyces fulvissimus DSM 40593, complete genomePrecorrin-6Y C(5,15)-methyltransferase2e-1375.5
NC_007681:1608223:163099416309941631617624Methanosphaera stadtmanae DSM 3091, complete genomeCbiE1e-1273.2
NC_011898:1558208:1585938158593815871251188Clostridium cellulolyticum H10, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit3e-1271.6
NC_014165:2928464:2928464292846429297021239Thermobispora bispora DSM 43833 chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit5e-1167.8
NC_020389:1730376:174386017438601744483624Methanosarcina mazei Tuc01, complete genomeCobalt-precorrin-6y C5-methyltransferase6e-1167.4
NC_016791:1132451:1149200114920011504081209Clostridium sp. BNL1100 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT1e-1066.6
NC_015065:232240:2432702432702444931224Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit6e-1063.9
NC_016627:4203775:4212079421207942132781200Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit3e-0961.6
NC_011059:1391734:1408793140879314102021410Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-3B C17-methyltransferase5e-0960.8
NC_012588:87592:934229342294105684Sulfolobus islandicus M.14.25 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase4e-0858.2
NC_012632:87590:934209342094103684Sulfolobus islandicus M.16.27 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase4e-0858.2
NC_008595:2432184:2446571244657124477401170Mycobacterium avium 104, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating)4e-0858.2
NC_012589:87592:934229342294105684Sulfolobus islandicus L.S.2.15, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit3e-0858.2
NC_013769:87582:934269342694109684Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE3e-0858.2
NC_017276:85380:932699326993952684Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-6y C5,15-methyltransferase(decarboxylating), CbiE subunit3e-0858.2
NC_011758:326366:3263663263663276071242Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit4e-0857.8
NC_002935:1237585:1237585123758512388321248Corynebacterium diphtheriae NCTC 13129, complete genomePutative precorrin-6Y C5,15-methyltransferase7e-0857.4
NC_015519:488550:493294493294494025732Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-3B C17-methyltransferase6e-0857.4
NC_016801:1255611:1256411125641112576911281Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase7e-0857
NC_016790:1177349:1178150117815011794301281Corynebacterium diphtheriae VA01 chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase7e-0857
NC_010511:2703684:2706697270669727079411245Methylobacterium sp. 4-46 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE6e-0753.9
NC_013159:1807599:1833522183352218347511230Saccharomonospora viridis DSM 43017, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating)3e-0651.6
NC_020829:636773:6541906541906558391650Pseudomonas denitrificans ATCC 13867, complete genomeprecorrin-3B C17-methyltransferase7e-0650.4