Pre_GI: BLASTP Hits

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Query: NC_004631:2872192:2889224 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2889224, End: 2889520, Length: 297

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2859491:287652328765232876819297Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-51201
NC_003198:2856596:290336729033672903663297Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-51201
NC_011147:2814664:286144628614462861826381Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-51201
NC_016831:2867766:291492529149252915305381Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-51200
NC_011294:2919906:293766129376612938041381Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-51200
NC_006511:2819128:286591028659102866224315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-51200
NC_011083:3009760:302750730275073027887381Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein2e-50197
NC_003197:3005842:305290230529023053282381Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-50197
NC_012125:2938519:298691029869102987290381Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-50197
NC_006905:2987863:300652830065283006908381Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-50197
NC_011274:2909799:292846529284652928845381Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-50197
NC_016810:3028421:307547830754783075858381Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-50197
NC_016856:3026426:307313930731393073519381Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-50197
NC_016857:3028421:307547830754783075858381Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-50197
NC_011205:3078732:309739330973933097773381Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-50197
NC_010102:2967464:301762030176203018000381Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-50197
NC_017046:3027161:307421830742183074598381Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-50197
NC_016863:2974333:302139230213923021772381Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-50197
NC_016860:3029272:307633230763323076712381Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein2e-50197
NC_011094:2913500:295823929582392958619381Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-50196
NC_011149:2912219:296305829630582963438381Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein1e-49194
NC_011080:2982346:303115030311503031530381Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein7e-49192
NC_020064:2960332:297789929778992978291393Serratia marcescens FGI94, complete genomehypothetical protein3e-22103
NC_014306:4901390:490444649044464904826381Erwinia billingiae Eb661, complete genomePutative cytoplasmic protein2e-2097.4