Pre_GI: BLASTP Hits

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Query: NC_004631:2872192:2885923 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2885923, End: 2886108, Length: 186

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2814664:285814428581442858329186Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-29127
NC_006511:2819128:286260828626082862793186Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-29127
NC_003198:2856596:290006629000662900251186Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-29127
NC_011094:2913500:295493629549362955457522Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-26115
NC_003197:3005842:304959930495993050120522Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein7e-26115
NC_016810:3028421:307217530721753072696522Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-26115
NC_016856:3026426:306983630698363070357522Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein7e-26115
NC_016857:3028421:307217530721753072696522Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein7e-26115
NC_016863:2974333:301808930180893018610522Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein7e-26115
NC_011083:3009760:302420430242043024389186Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein2e-25114
NC_016860:3029272:307302930730293073214186Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein2e-25114
NC_011205:3078732:309243730924373092931495Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-1476.3
NC_011080:2982346:302619430261943026688495Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-1476.3
NC_011149:2912219:295810229581022958596495Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-1475.9
NC_010102:2967464:301266530126653013159495Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1375.1
NC_011294:2919906:293270629327062933200495Salmonella enterica subsp. enterica serovar Enteritidis strmembrane protein2e-1374.3
NC_016831:2867766:290997029099702910464495Salmonella enterica subsp. enterica serovar Gallinarum/pullorummembrane protein2e-1374.3
NC_011274:2909799:292351029235102924004495Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1373.9
NC_012125:2938519:298195529819552982449495Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1373.6
NC_006905:2987863:300157330015733002067495Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-1373.2
NC_017046:3027161:307091530709153071022108Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-1269.7